Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC002543.1-201ENST00000299783 1954 ntBASIC2.61□□□□□ -1.99
SIN3AQ96ST3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.61□□□□□ -1.99
SIN3AQ96ST3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 RNU6-212P-201ENST00000362642 104 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 RNU6-486P-201ENST00000363116 107 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 SNORA67.1-201ENST00000364749 141 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 SNORD48-201ENST00000364953 64 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 SNRPGP7-201ENST00000469016 106 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 RPL22P13-201ENST00000493291 347 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 APOOP3-201ENST00000536787 586 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 MIR3199-1-201ENST00000582434 88 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC018889.1-201ENST00000605372 397 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AP000654.2-201ENST00000605633 586 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC009541.1-201ENST00000438279 2662 ntBASIC2.6□□□□□ -1.99
SIN3AQ96ST3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIN3AQ96ST3 SNORD50.1-201ENST00000362987 71 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RNU6-596P-201ENST00000365395 98 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 MIR583-201ENST00000384846 75 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RNU6-174P-201ENST00000410406 106 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RNU6-370P-201ENST00000411008 104 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 HMGN2P19-201ENST00000425149 265 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 RNU6-559P-201ENST00000516151 98 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 SCARNA3-201ENST00000517097 143 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 HSPE1P4-201ENST00000550617 308 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 FRG2DP-202ENST00000566967 323 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 MIR4795-201ENST00000584182 89 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.59□□□□□ -1.99
SIN3AQ96ST3 MIR7157-201ENST00000635801 60 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 AL450472.1-202ENST00000637286 180 ntBASIC2.59□□□□□ -1.99
SIN3AQ96ST3 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -2
SIN3AQ96ST3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 U3.13-201ENST00000364804 214 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNY3P1-201ENST00000365085 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNY3-201ENST00000365484 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 SNORD116-29-201ENST00000384516 83 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.58□□□□□ -2
SIN3AQ96ST3 AC007677.1-201ENST00000445757 515 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC079354.2-201ENST00000453523 154 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC107393.1-201ENST00000512403 346 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.58□□□□□ -2
SIN3AQ96ST3 ACA59.1-201ENST00000515966 143 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC109446.1-201ENST00000566172 220 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.58□□□□□ -2
SIN3AQ96ST3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
SIN3AQ96ST3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.58□□□□□ -2
SIN3AQ96ST3 AC009229.3-201ENST00000608056 282 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 AC084768.2-201ENST00000622736 221 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SIN3AQ96ST3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SIN3AQ96ST3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 MTND4P1-201ENST00000457501 1466 ntBASIC2.58□□□□□ -2
SIN3AQ96ST3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SIN3AQ96ST3 RNU4-79P-201ENST00000362764 141 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 SNORA26.3-201ENST00000391119 136 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.57□□□□□ -2
SIN3AQ96ST3 AC078809.1-201ENST00000427601 140 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 AC244670.1-201ENST00000436879 112 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.57□□□□□ -2
SIN3AQ96ST3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.57□□□□□ -2
SIN3AQ96ST3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
SIN3AQ96ST3 RPL7P42-201ENST00000481005 679 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms