Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC008752.3-201ENST00000588113 712 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AL031281.1-201ENST00000604049 488 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 CTHRC1P1-201ENST00000605383 469 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 MIR98-201ENST00000606724 119 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AL139286.2-201ENST00000606838 396 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC144521.1-201ENST00000607148 956 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AL158211.2-201ENST00000607282 395 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC021506.2-201ENST00000612354 169 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC106754.2-201ENST00000623006 233 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 SNORD3E-202ENST00000627253 216 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AL157786.1-207ENST00000627771 695 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC073343.1-201ENST00000328239 651 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 RNU6-37P-201ENST00000362692 107 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 SNORD56.2-201ENST00000363242 71 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 RNU6-11P-201ENST00000364234 107 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 RNU6-950P-201ENST00000384651 107 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 RNA5SP109-201ENST00000391010 116 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC010154.1-201ENST00000425857 269 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC000111.3-201ENST00000433478 193 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC073614.1-201ENST00000438690 650 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC105758.1-201ENST00000506038 399 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC092451.2-201ENST00000538746 658 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC090888.2-201ENST00000559765 1144 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC090517.1-201ENST00000569307 266 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 MIR3923-201ENST00000579521 83 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 MIR4307-201ENST00000582802 84 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC068787.1-201ENST00000623908 691 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 U4.7-201ENST00000638126 106 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
LYSMD1Q96S90 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
LYSMD1Q96S90 RNU6-545P-201ENST00000362681 104 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 RNU6-378P-201ENST00000384324 107 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 USP9YP28-201ENST00000435142 589 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 RPL22P17-201ENST00000438729 315 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 EEF1A1P39-201ENST00000440791 250 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AC022616.6-201ENST00000520479 119 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.32□□□□□ -2.36
LYSMD1Q96S90 MIR5695-201ENST00000579717 85 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 MIR5692A1-201ENST00000580523 69 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AC078795.3-201ENST00000602913 472 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 RPL17P51-201ENST00000605218 238 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 GHRLOS.1-201ENST00000610995 70 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 MIR338-201ENST00000636369 67 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 AC006927.4-201ENST00000639187 543 ntBASIC0.32□□□□□ -2.36
LYSMD1Q96S90 Y_RNA.110-201ENST00000363220 99 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 Y_RNA.112-201ENST00000363250 102 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 RNU6-371P-201ENST00000364283 108 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 RNU6-1141P-201ENST00000364520 107 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AL353777.1-201ENST00000425552 326 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AL358794.1-201ENST00000445689 381 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AL162395.1-201ENST00000457882 422 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 RPS23P5-201ENST00000495419 428 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC116347.2-201ENST00000514912 523 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 TPRKBP2-201ENST00000565969 475 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC073539.2-201ENST00000597113 165 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.31□□□□□ -2.36
LYSMD1Q96S90 AC097478.2-201ENST00000610572 514 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 PCGEM1.1-201ENST00000613431 131 ntBASIC0.31□□□□□ -2.36
LYSMD1Q96S90 RNY4P24-201ENST00000362735 96 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU1-76P-201ENST00000362903 159 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 SNORD114-23-201ENST00000363536 72 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-25P-201ENST00000383873 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-641P-201ENST00000384006 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-48P-201ENST00000384161 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-39P-201ENST00000384344 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 SNORA24.1-201ENST00000384401 135 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-809P-201ENST00000384461 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-15P-201ENST00000384534 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-29P-201ENST00000384637 107 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 MIR216A-201ENST00000385063 110 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RPL22P18-201ENST00000417197 377 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AL035398.1-201ENST00000430869 322 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 MTND3P1-201ENST00000441336 220 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 GAPDHP17-201ENST00000449858 1001 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 MTND1P12-201ENST00000455231 147 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-377P-201ENST00000515965 102 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNA5SP337-201ENST00000517007 109 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.3□□□□□ -2.36
LYSMD1Q96S90 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms