Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AF186996.7-201ENST00000492781 209 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 MTCO2P30-201ENST00000503662 364 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 RNU5F-4P-201ENST00000516581 114 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 RNU6-566P-201ENST00000516790 107 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 RNA5SP454-201ENST00000517231 127 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AP005639.2-201ENST00000527592 928 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC009831.4-201ENST00000620744 325 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB40CQ96S21 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB40CQ96S21 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AL136360.1-201ENST00000503377 1900 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 SNORD50.1-201ENST00000362987 71 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 SNORA51.11-201ENST00000384442 131 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 SNORA48.3-201ENST00000391081 134 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 AL356432.1-201ENST00000405809 419 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 AL356776.1-201ENST00000406574 447 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 RPS26P42-201ENST00000413485 326 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 RPL30P16-201ENST00000419341 429 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 BX510359.4-201ENST00000423750 193 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 FTH1P25-201ENST00000447665 469 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 AC087477.1-201ENST00000465747 340 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 UBE2DNL-203ENST00000474922 222 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40CQ96S21 ATP5EP1-201ENST00000510257 156 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 RNU6-1098P-201ENST00000516772 96 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40CQ96S21 AC026464.5-201ENST00000562497 722 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 MIR3162-201ENST00000581818 82 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 RPL17P51-201ENST00000605218 238 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.8□□□□□ -2.12
RAB40CQ96S21 U1.36-201ENST00000620684 176 ntBASIC1.8□□□□□ -2.12
RAB40CQ96S21 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RAB40CQ96S21 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RAB40CQ96S21 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RAB40CQ96S21 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU1-58P-201ENST00000362413 163 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 Y_RNA.248-201ENST00000364501 109 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 Y_RNA.301-201ENST00000364990 103 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU4-52P-201ENST00000384209 138 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU11-3P-201ENST00000391111 133 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU6-510P-201ENST00000391239 108 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AL139396.1-201ENST00000421137 167 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 HMGN2P3-201ENST00000433603 273 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 HMGN2P5-201ENST00000436882 273 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 MTND1P17-201ENST00000448961 204 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AC079354.2-201ENST00000453523 154 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 RNU6-329P-201ENST00000459618 107 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AC018710.1-201ENST00000506509 158 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AP002770.2-201ENST00000543613 532 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 MIR4790-201ENST00000577799 79 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 AC009318.2-201ENST00000610917 651 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 MIR6132-201ENST00000622083 109 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 AP000553.5-201ENST00000641933 54 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.79□□□□□ -2.12
RAB40CQ96S21 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.79□□□□□ -2.12
RAB40CQ96S21 CENPCP1-201ENST00000533085 2578 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 RNU1-76P-201ENST00000362903 159 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 Y_RNA.332-201ENST00000365271 113 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 SNORA18.2-201ENST00000383865 132 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 RNU6-160P-201ENST00000384591 107 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 SNORA67.4-201ENST00000384688 142 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 AL033519.2-201ENST00000403958 392 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 EIF4EP2-201ENST00000422816 654 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC027124.2-201ENST00000428249 105 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AL139415.2-201ENST00000431968 163 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 OR2AQ1P-201ENST00000451972 200 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 PPP1R2P5-201ENST00000457256 603 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 TOMM22P6-201ENST00000465035 409 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 RPL23AP42-201ENST00000471152 471 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 RPL23AP75-201ENST00000491601 451 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 RPS23P5-201ENST00000495419 428 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC234781.5-201ENST00000508429 271 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms