Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL353778.1-201ENST00000603149 408 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 AC100812.1-201ENST00000607622 580 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 SCARNA4-202ENST00000625402 129 ntBASIC-0.09□□□□□ -2.42
IFT140Q96RY7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.09□□□□□ -2.42
IFT140Q96RY7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
IFT140Q96RY7 MIR103A1-201ENST00000362165 78 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 RNU6-853P-201ENST00000364306 107 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 SNORD31B-201ENST00000364977 69 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.42
IFT140Q96RY7 RNY1P8-201ENST00000383970 114 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 RNA5SP219-201ENST00000390940 113 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 SEPT14P24-201ENST00000447236 180 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AC011406.1-201ENST00000512440 370 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AC115990.1-201ENST00000526957 301 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AC141557.1-201ENST00000540982 400 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AC021231.3-201ENST00000558497 370 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AC090888.2-201ENST00000559765 1144 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.42
IFT140Q96RY7 BNIP3P26-201ENST00000600827 554 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.1□□□□□ -2.42
IFT140Q96RY7 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.42
IFT140Q96RY7 MIR412-201ENST00000362142 91 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AL355796.1-201ENST00000406706 323 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AC060773.1-201ENST00000421698 310 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AC010154.1-201ENST00000425857 269 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AC093899.1-201ENST00000457984 376 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 MTATP6P9-201ENST00000515039 680 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 SNORA14.1-201ENST00000516113 141 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.1□□□□□ -2.43
IFT140Q96RY7 SUB1P2-201ENST00000556401 297 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 MIR4431-201ENST00000579990 94 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AL034555.1-201ENST00000604816 211 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.1□□□□□ -2.43
IFT140Q96RY7 AC092268.1-201ENST00000342691 405 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 RNU4-73P-201ENST00000363164 141 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 RNU6-289P-201ENST00000364093 107 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 RNU6-650P-201ENST00000365658 111 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 RNU6-877P-201ENST00000383868 107 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 RNU6-793P-201ENST00000384233 104 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 CALM2P3-201ENST00000400429 449 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AL034345.1-201ENST00000407768 123 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 ZNF886P-201ENST00000450781 723 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC022364.2-201ENST00000457963 554 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC016925.1-201ENST00000458303 298 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AC091805.2-201ENST00000603848 235 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AL353149.1-201ENST00000610667 244 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.11□□□□□ -2.43
IFT140Q96RY7 AL157786.1-207ENST00000627771 695 ntBASIC-0.11□□□□□ -2.43
IFT140Q96RY7 MTND4P5-201ENST00000435821 1374 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU4-76P-201ENST00000364509 141 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.12□□□□□ -2.43
IFT140Q96RY7 MIR544A-201ENST00000384855 91 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 MIR140-201ENST00000385282 100 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 SNORD41-201ENST00000386967 70 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.12□□□□□ -2.43
IFT140Q96RY7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RPL23AP50-201ENST00000434149 455 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AC022447.4-201ENST00000504053 364 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU1-86P-201ENST00000516108 154 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU1-107P-201ENST00000516617 154 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 RNU6-677P-201ENST00000516914 101 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AC021451.1-201ENST00000523498 1129 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AC110760.3-201ENST00000598794 467 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 AL162730.1-201ENST00000605734 292 ntBASIC-0.12□□□□□ -2.43
IFT140Q96RY7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
IFT140Q96RY7 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 RNA5SP109-201ENST00000391010 116 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AC007969.2-201ENST00000441891 191 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 RNU6-856P-201ENST00000516959 98 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AL606834.3-201ENST00000602615 496 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AL445435.1-201ENST00000604232 665 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 MIR15A-201ENST00000607334 83 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AC124016.2-201ENST00000610058 665 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AC024940.5-201ENST00000622889 474 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 AL603839.4-201ENST00000624658 1005 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 MTND5P33-201ENST00000571250 1450 ntBASIC-0.13□□□□□ -2.43
IFT140Q96RY7 MIR101-1-201ENST00000362265 75 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms