Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 UBL5P4-201ENST00000562584 236 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 MIR5695-201ENST00000579717 85 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AL078605.1-201ENST00000603529 500 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC062037.2-201ENST00000610137 73 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 uc_338.14-201ENST00000613162 166 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AC137590.2-201ENST00000619709 240 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 MIR622-201ENST00000638396 96 ntBASIC2.8□□□□□ -1.96
SNX18Q96RF0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX18Q96RF0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX18Q96RF0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX18Q96RF0 OR56A5-201ENST00000340110 738 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RNA5SP374-201ENST00000362939 125 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RNU6-926P-201ENST00000384075 107 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 SNORA7.4-201ENST00000384249 137 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 MIR634-201ENST00000385208 97 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 MT-TG-201ENST00000387429 68 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RNU1-139P-201ENST00000391307 165 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RPL21P38-201ENST00000418090 167 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC012306.1-201ENST00000423267 114 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 WARS2P1-201ENST00000429678 537 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 RPS15AP7-201ENST00000439294 405 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC098869.1-201ENST00000481627 292 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 RPL36AP48-201ENST00000485521 314 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AP003733.2-201ENST00000529409 171 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC093023.1-201ENST00000547375 507 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC023824.2-201ENST00000566185 400 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 SNORD98-201ENST00000636377 67 ntBASIC2.79□□□□□ -1.96
SNX18Q96RF0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SNX18Q96RF0 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNA5SP361-201ENST00000362686 118 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNU6-318P-201ENST00000384283 103 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 MIR10B-201ENST00000385011 110 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNA5SP213-201ENST00000391031 106 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 SNORD78.2-201ENST00000391076 69 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 SNORA26.3-201ENST00000391119 136 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 CYCSP48-201ENST00000417124 323 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 Z75741.1-201ENST00000446793 314 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 RNU6-58P-201ENST00000517143 103 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 MIR4659A-201ENST00000580269 81 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC073410.2-201ENST00000603240 332 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC240442.1-201ENST00000616055 283 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 AC005296.1-201ENST00000616145 209 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 AL109809.4-201ENST00000603520 2185 ntBASIC2.78□□□□□ -1.96
SNX18Q96RF0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX18Q96RF0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SNX18Q96RF0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 Y_RNA.476-201ENST00000384347 108 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 RNU6-159P-201ENST00000391080 106 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 AL079342.1-201ENST00000401460 267 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 RNU2-20P-201ENST00000410425 191 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 Z98742.2-201ENST00000431564 187 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC108059.2-201ENST00000434626 151 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC096638.1-201ENST00000444678 216 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 RNU6-408P-201ENST00000515910 100 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 SNORA31.6-201ENST00000516241 130 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 RNU6-567P-201ENST00000516746 107 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX18Q96RF0 AC136932.1-201ENST00000574771 208 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 MIR3136-201ENST00000583498 78 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 AL138963.2-201ENST00000605137 226 ntBASIC2.77□□□□□ -1.97
SNX18Q96RF0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms