Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR3923-201ENST00000579521 83 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 AL391646.1-201ENST00000603860 190 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC025449.1-201ENST00000603896 529 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AP001596.2-201ENST00000608410 312 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 MTND5P26-201ENST00000426018 1752 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU1-62P-201ENST00000362599 164 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 Y_RNA.41-201ENST00000362646 102 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 Y_RNA.191-201ENST00000363972 113 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNY1-201ENST00000364228 113 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU6-336P-201ENST00000364891 107 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU5A-6P-201ENST00000384136 116 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU6-1103P-201ENST00000384150 107 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 SNORD116-4-201ENST00000384733 96 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU2-9P-201ENST00000410194 145 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNA5SP100-201ENST00000410903 110 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNA5SP59-201ENST00000410922 110 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 MTCO3P41-201ENST00000414801 328 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RPL23AP95-201ENST00000426806 265 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 MTCO2P19-201ENST00000427513 598 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AL133396.1-201ENST00000432048 687 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 TPTE2P5-203ENST00000458118 728 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC016632.1-201ENST00000503994 196 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNU2-69P-201ENST00000516061 100 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 RNA5SP220-201ENST00000516298 104 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AL136221.1-201ENST00000621449 509 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 AC097372.5-201ENST00000623665 376 ntBASIC1.35□□□□□ -2.19
COL21A1Q96P44 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.35□□□□□ -2.19
COL21A1Q96P44 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL21A1Q96P44 MIR126-201ENST00000362291 85 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RNU6-623P-201ENST00000363143 105 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 U3.9-201ENST00000363823 204 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 Y_RNA.296-201ENST00000364930 108 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 Y_RNA.381-201ENST00000365666 102 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RNU6-1042P-201ENST00000384204 107 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 Y_RNA.517-201ENST00000384551 106 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 MTATP6P18-201ENST00000417994 673 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AL117339.3-201ENST00000418733 162 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AL353193.1-201ENST00000421444 268 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AL590135.1-201ENST00000422215 156 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC019205.3-201ENST00000424573 156 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC073464.1-201ENST00000429823 534 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 SNAP23P1-201ENST00000433229 246 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC016700.2-201ENST00000446011 156 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 HMGN2P18-201ENST00000450680 270 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AL356010.1-201ENST00000456364 102 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RPS29P15-201ENST00000458329 171 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC015911.1-201ENST00000495111 156 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC091435.1-201ENST00000505442 584 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 HMGB1P29-201ENST00000505659 499 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 SNORD60.2-201ENST00000516883 86 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC007684.1-201ENST00000609671 477 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 MIR6779-201ENST00000617283 64 ntBASIC1.34□□□□□ -2.19
COL21A1Q96P44 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.2
COL21A1Q96P44 MTND4P14-201ENST00000435799 1354 ntBASIC1.34□□□□□ -2.2
COL21A1Q96P44 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 Y_RNA.1-201ENST00000352915 104 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 SNORD32A-201ENST00000364805 84 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNU6-1127P-201ENST00000384580 107 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNU6-1106P-201ENST00000390845 107 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 SNORD70.1-201ENST00000391007 85 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNA5SP201-201ENST00000410316 124 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 RNU4-55P-201ENST00000410731 137 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 AC025465.3-201ENST00000510570 311 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AC010493.1-201ENST00000513479 292 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 Y_RNA.655-201ENST00000515919 96 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 SNORA25.17-201ENST00000517184 124 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 AC021231.3-201ENST00000558497 370 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 SUB1P4-201ENST00000566062 339 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 MIR4452-201ENST00000583004 71 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AL512598.1-201ENST00000610158 273 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms