Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 COX6CP10-201ENST00000416832 224 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 TAAR7P-201ENST00000436141 242 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.85□□□□□ -2.55
CFAP54Q96N23 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.85□□□□□ -2.55
CFAP54Q96N23 AC013476.2-201ENST00000614456 459 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 AC116165.2-201ENST00000616705 206 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 SCARNA4-202ENST00000625402 129 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 RNU6-161P-201ENST00000363051 106 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.85□□□□□ -2.55
CFAP54Q96N23 AC098679.4-201ENST00000624241 654 ntBASIC-0.85□□□□□ -2.55
CFAP54Q96N23 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.86□□□□□ -2.55
CFAP54Q96N23 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.86□□□□□ -2.55
CFAP54Q96N23 RNU6-881P-201ENST00000516813 102 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 SUB1P2-201ENST00000556401 297 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 BNIP3P23-201ENST00000599655 511 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 BNIP3P39-201ENST00000601077 554 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 AC098592.2-201ENST00000413158 265 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.86□□□□□ -2.55
CFAP54Q96N23 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.86□□□□□ -2.55
CFAP54Q96N23 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.86□□□□□ -2.55
CFAP54Q96N23 RNU6-884P-201ENST00000363889 107 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 MIR873-201ENST00000401120 77 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC123900.1-201ENST00000420390 96 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC012308.1-201ENST00000451232 178 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNU7-129P-201ENST00000516128 62 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNU6-156P-201ENST00000621869 107 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC093875.1-201ENST00000623688 504 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 MIR548B-201ENST00000385247 97 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AL590002.1-201ENST00000406554 418 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNA5SP504-201ENST00000410676 117 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC024082.2-201ENST00000434771 238 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNA5SP94-201ENST00000516917 108 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC092470.1-201ENST00000546187 132 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AL391813.1-201ENST00000603098 260 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 SMIM11P1-201ENST00000369586 178 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AL589994.1-201ENST00000404962 340 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC092170.1-201ENST00000440211 356 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 SNORD60.2-201ENST00000516883 86 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC011979.2-201ENST00000527568 352 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC055876.5-201ENST00000605667 259 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC063944.3-201ENST00000609969 533 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC008993.2-201ENST00000631744 806 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 AC068205.3-201ENST00000636385 468 ntBASIC-0.87□□□□□ -2.55
CFAP54Q96N23 SNORA12-201ENST00000391162 147 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC133104.1-201ENST00000429100 218 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC245047.8-201ENST00000456455 284 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 RNU6-848P-201ENST00000515948 107 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 RNU6-617P-201ENST00000516147 107 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 RNU6-473P-201ENST00000516164 107 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.88□□□□□ -2.55
CFAP54Q96N23 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 MIR520G-201ENST00000385064 90 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 MIR520H-201ENST00000385126 88 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.88□□□□□ -2.55
CFAP54Q96N23 MTND2P4-201ENST00000445034 1004 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.88□□□□□ -2.55
CFAP54Q96N23 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.88□□□□□ -2.55
CFAP54Q96N23 MIR3167-201ENST00000579623 85 ntBASIC-0.88□□□□□ -2.55
CFAP54Q96N23 RNA5SP258-201ENST00000362750 119 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 RNU6-296P-201ENST00000384608 107 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.89□□□□□ -2.55
CFAP54Q96N23 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 SNORD19.2-201ENST00000516978 73 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 MIR5692A1-201ENST00000580523 69 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 MIR6514-201ENST00000622549 70 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 MIR499B-201ENST00000636498 73 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
CFAP54Q96N23 SNORD115-42-201ENST00000364273 82 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 AC092427.1-201ENST00000439177 601 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 AC079140.3-201ENST00000511111 550 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.89□□□□□ -2.55
CFAP54Q96N23 AC134698.4-201ENST00000523451 826 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.89□□□□□ -2.55
CFAP54Q96N23 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-811P-201ENST00000384069 107 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-532P-201ENST00000384318 107 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-679P-201ENST00000391003 106 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-796P-201ENST00000391086 107 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC098831.1-201ENST00000440661 216 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms