Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC069113.1-201ENST00000517763 267 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC109479.2-201ENST00000517842 174 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC034114.1-201ENST00000520293 285 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 GNAI2P1-201ENST00000541815 315 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC022254.1-201ENST00000567857 235 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 MIR4419B-201ENST00000577260 68 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC023043.2-201ENST00000589678 1026 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC096772.1-201ENST00000609146 564 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.15-201ENST00000611544 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC092794.1-201ENST00000612734 582 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.16-201ENST00000613119 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.12-201ENST00000613778 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.20-201ENST00000613956 192 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.9-201ENST00000615427 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.11-201ENST00000616345 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.2-201ENST00000616535 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.3-201ENST00000617785 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.19-201ENST00000618602 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 RNU2-1-201ENST00000618664 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.6-201ENST00000619225 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.5-201ENST00000619465 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 AC009248.2-201ENST00000619826 254 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 U2.10-201ENST00000620268 191 ntBASIC1.37□□□□□ -2.19
LINC00477Q96M19 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC00477Q96M19 MIR340-201ENST00000362125 95 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 Y_RNA.123-201ENST00000363338 102 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 SNORD32B-201ENST00000364460 84 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 Y_RNA.303-201ENST00000364998 94 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 SNORA26.3-201ENST00000391119 136 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL356776.1-201ENST00000406574 447 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 RNA5SP201-201ENST00000410316 124 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 RNU4-14P-201ENST00000410858 122 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 RNU2-32P-201ENST00000411193 191 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 PDCL2P1-201ENST00000419302 352 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 MTND1P2-201ENST00000430604 821 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL133396.1-201ENST00000432048 687 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC079354.2-201ENST00000453523 154 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC007547.1-201ENST00000462177 490 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 MTND4P17-201ENST00000470444 350 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC018710.1-201ENST00000506509 158 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 RNU6-358P-201ENST00000516564 75 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 NDUFA5P6-201ENST00000542110 379 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 DEFB122-202ENST00000569013 197 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC060780.3-201ENST00000589464 80 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 Z98751.3-201ENST00000604447 521 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 AL133215.3-201ENST00000609801 448 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC008121.3-201ENST00000618726 433 ntBASIC1.36□□□□□ -2.19
LINC00477Q96M19 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC00477Q96M19 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC00477Q96M19 RNU6-1141P-201ENST00000364520 107 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC00477Q96M19 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 SNORD116-11-201ENST00000383882 92 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 SNORA29-201ENST00000384183 140 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 Y_RNA.530-201ENST00000384587 101 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 RN7SKP61-201ENST00000410642 295 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 RPS20P15-201ENST00000412792 311 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AL445305.1-201ENST00000432577 575 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 HSPE1P21-201ENST00000438283 308 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 SNORA44.1-201ENST00000517031 108 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC026371.1-201ENST00000551867 419 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 MIR4742-201ENST00000581069 85 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC100830.2-201ENST00000581636 240 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC018638.8-201ENST00000588755 281 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 VN1R107P-201ENST00000601784 209 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 SNRPGP17-201ENST00000603780 214 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC018889.1-201ENST00000605372 397 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
LINC00477Q96M19 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.35□□□□□ -2.19
LINC00477Q96M19 AC007792.1-201ENST00000623023 402 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms