Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Z75746.1-201ENST00000440243 2080 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 AP000560.1-201ENST00000624150 1937 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AL359854.1-201ENST00000614203 1594 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 Z82195.2-201ENST00000612348 18351 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 RNU6-461P-201ENST00000364195 107 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 Y_RNA.389-201ENST00000383924 113 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 Y_RNA.557-201ENST00000384680 107 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 RNU6-823P-201ENST00000391042 103 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AL356057.3-201ENST00000402607 340 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 MTCYBP2-201ENST00000407745 171 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC097463.2-201ENST00000421074 142 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS50Q96JG6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 snoU13.14-201ENST00000459372 104 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 HMGB1P35-201ENST00000503360 598 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 RNU6-764P-201ENST00000516396 105 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 Y_RNA.720-201ENST00000517166 92 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC144568.1-201ENST00000520139 137 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC023442.1-201ENST00000531247 422 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC021231.3-201ENST00000558497 370 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC090616.3-201ENST00000582184 217 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 MIR7515-201ENST00000637837 67 ntBASIC2.8□□□□□ -1.96
VPS50Q96JG6 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS50Q96JG6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS50Q96JG6 SNORA5B-201ENST00000363786 132 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 SNORD115-32-201ENST00000364079 82 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC117470.1-201ENST00000381974 330 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AL512633.1-201ENST00000399931 655 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC012306.1-201ENST00000423267 114 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS50Q96JG6 AP001486.1-201ENST00000463339 476 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 MTATP8P1-201ENST00000467115 207 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AP000870.1-201ENST00000472927 406 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AL121594.1-201ENST00000475906 575 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AL049873.1-201ENST00000480540 376 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS50Q96JG6 RNA5SP367-201ENST00000516557 118 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC109329.1-201ENST00000518744 317 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC115990.1-201ENST00000526957 301 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC016256.1-201ENST00000547971 354 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 MIR4513-201ENST00000581077 86 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 MIR3616-201ENST00000584070 92 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AL162730.1-201ENST00000605734 292 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 RMST_6.1-201ENST00000611980 203 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AC007318.2-201ENST00000620999 243 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 AL078596.1-201ENST00000624856 447 ntBASIC2.79□□□□□ -1.96
VPS50Q96JG6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS50Q96JG6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AL355596.1-201ENST00000565399 3996 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 Y_RNA.153-201ENST00000363615 91 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 Y_RNA.455-201ENST00000384230 98 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 RNU1-57P-201ENST00000384491 166 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 U8.20-201ENST00000459445 131 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 ANXA2P1-201ENST00000505539 926 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 RNU6-475P-201ENST00000516073 104 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 RNU2-53P-201ENST00000516257 147 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 SNORA31.15-201ENST00000516771 132 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC027288.2-201ENST00000553028 243 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 UBL5P4-201ENST00000562584 236 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC113195.1-201ENST00000579952 141 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 VN1R91P-201ENST00000594377 169 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 AL034555.1-201ENST00000604816 211 ntBASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS50Q96JG6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
VPS50Q96JG6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS50Q96JG6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 AC073325.2-201ENST00000339545 159 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 RNU4-15P-201ENST00000362613 141 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 SNORA80A-201ENST00000363922 136 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 Y_RNA.424-201ENST00000384063 103 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 MIR153-2-201ENST00000385225 87 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 HMGB3P2-201ENST00000411913 584 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AC114482.1-201ENST00000418010 247 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms