Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL353689.1-201ENST00000438895 199 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 MTCYBP18-201ENST00000501056 747 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AP003033.1-201ENST00000527244 415 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 SCOCP1-201ENST00000554676 349 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AC090517.1-201ENST00000569307 266 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AC007014.2-201ENST00000615581 479 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AL160394.1-201ENST00000624765 724 ntBASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SNRNP40Q96DI7 AC007336.1-201ENST00000576365 3828 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 RNU6-254P-201ENST00000363377 107 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.157-201ENST00000363638 102 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 SNORD113-7-201ENST00000363762 77 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP213-201ENST00000391031 106 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AL158823.1-201ENST00000418441 478 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 TRBVA-201ENST00000498804 316 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AC092794.1-201ENST00000612734 582 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.93□□□□□ -2.1
SNRNP40Q96DI7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU1-17P-201ENST00000363022 152 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU6-128P-201ENST00000383976 107 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU2-41P-201ENST00000410991 178 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU6-325P-201ENST00000411132 105 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 CYCSP49-201ENST00000420810 319 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RNU7-14P-201ENST00000459331 62 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC092989.1-201ENST00000481235 277 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC087241.2-201ENST00000535801 324 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC016256.1-201ENST00000547971 354 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 PRELID2P1-201ENST00000552837 301 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 RPL17P51-201ENST00000605218 238 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 MIR6845-201ENST00000613182 61 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC002553.4-201ENST00000616896 331 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AC090617.10-201ENST00000624308 134 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 MIR3662-201ENST00000637030 95 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 AL450472.1-202ENST00000637286 180 ntBASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU6-1252P-201ENST00000363054 104 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 Y_RNA.135-201ENST00000363439 95 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU6-968P-201ENST00000384076 107 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU6-790P-201ENST00000384479 105 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 SNORA80E-201ENST00000384744 137 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNA5SP494-201ENST00000410653 129 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AL030996.1-201ENST00000411430 235 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 ZNF885P-201ENST00000420174 1098 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AL513185.2-201ENST00000425543 193 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RPL23AP3-201ENST00000453844 468 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC007547.1-201ENST00000462177 490 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RPS23P5-201ENST00000495419 428 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC096745.1-201ENST00000509945 370 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 MTND4LP26-201ENST00000518144 282 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 SNORA59B-202ENST00000578183 701 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SNRNP40Q96DI7 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms