Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR644A-201ENST00000385262 94 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 TPMTP2-201ENST00000414372 726 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MTCO2P1-201ENST00000424648 477 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC090502.2-201ENST00000549267 280 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC090888.2-201ENST00000559765 1144 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MIR4431-201ENST00000579990 94 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 SNRPGP20-201ENST00000604477 205 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC008147.4-201ENST00000617570 1204 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC009032.1-201ENST00000617574 431 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC104820.1-201ENST00000624183 307 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 SGO1P1-201ENST00000603525 1447 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNA5SP517-201ENST00000364724 117 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-701P-201ENST00000384059 107 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-891P-201ENST00000384280 111 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-843P-201ENST00000384454 104 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MIR593-201ENST00000384856 100 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNA5SP323-201ENST00000391094 133 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL603865.2-201ENST00000401679 213 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC027644.1-201ENST00000419595 298 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL590632.1-201ENST00000424289 371 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC008628.1-201ENST00000508663 265 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC091874.1-201ENST00000511402 339 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC098483.2-201ENST00000603158 454 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL390208.1-201ENST00000605885 644 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC004009.2-201ENST00000623016 728 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL356596.1-201ENST00000624230 379 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC092608.3-201ENST00000625017 386 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC019226.1-201ENST00000625666 515 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MIR1-1-201ENST00000362147 71 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MIR520F-201ENST00000384824 87 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RN7SKP266-201ENST00000410232 287 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-917P-201ENST00000516294 104 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 RNU6-948P-201ENST00000516374 107 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC069113.3-201ENST00000521019 150 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AC138869.1-201ENST00000568623 124 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 MIR4300-201ENST00000581016 96 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 AL031667.3-201ENST00000620124 655 ntBASIC-0.18□□□□□ -2.44
ALMS1Q8TCU4 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC006366.1-201ENST00000422002 759 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 MTND2P21-201ENST00000436242 1042 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 snoU13.14-201ENST00000459372 104 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 RBBP4P6-201ENST00000508098 202 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AK6P2-201ENST00000549020 471 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 BNIP3P30-201ENST00000601184 574 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC018889.1-201ENST00000605372 397 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC007014.2-201ENST00000615581 479 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 SNORD114-5-201ENST00000362928 70 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC002486.1-201ENST00000435098 391 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 RNU6-528P-201ENST00000516926 100 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 MIR643-201ENST00000385267 97 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC092170.1-201ENST00000440211 356 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 VN1R10P-201ENST00000447106 875 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC005042.3-201ENST00000453230 174 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 BNIP3P6-201ENST00000549284 499 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AP000943.4-201ENST00000622912 357 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 AC106754.2-201ENST00000623006 233 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
ALMS1Q8TCU4 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 SNORA42.1-201ENST00000363515 137 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 AC013262.1-201ENST00000426710 252 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 AC007000.2-201ENST00000442564 487 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 RNU6-714P-201ENST00000516963 103 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 RNU2-12P-201ENST00000517216 168 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 RNU6-622P-201ENST00000384272 103 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 RNU6-505P-201ENST00000384427 107 ntBASIC-0.2□□□□□ -2.44
ALMS1Q8TCU4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms