Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC009163.5-201ENST00000575421 637 ntBASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 MIR3910-1-201ENST00000580936 111 ntBASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.73□□□□□ -1.81
LINC00116Q8NCU8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 ADAM3A-203ENST00000461344 2157 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 Y_RNA.275-201ENST00000364726 110 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AP002088.1-201ENST00000382740 395 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 RNU6-47P-201ENST00000383866 107 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 Y_RNA.418-201ENST00000384029 102 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 RN7SKP61-201ENST00000410642 295 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AC078809.1-201ENST00000427601 140 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AC244670.1-201ENST00000436879 112 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 TRBV12-1-201ENST00000479785 344 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 Y_RNA.703-201ENST00000516846 111 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 RNU6-1212P-201ENST00000517023 104 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AC022559.1-201ENST00000520905 205 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LINC00116Q8NCU8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
LINC00116Q8NCU8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
LINC00116Q8NCU8 MIR410-201ENST00000362222 80 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.230-201ENST00000364348 109 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.331-201ENST00000365267 102 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.446-201ENST00000384178 104 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC010095.1-201ENST00000443543 144 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 RPL39P29-201ENST00000447779 157 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 HMGN2P10-201ENST00000448085 265 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 RPL30P12-201ENST00000474666 353 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AP001025.1-201ENST00000486139 332 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC091959.1-201ENST00000495857 238 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.683-201ENST00000516508 93 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC021231.3-201ENST00000558497 370 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC021739.1-201ENST00000559631 174 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 AC005176.2-201ENST00000596933 147 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 MIR3529-201ENST00000637713 78 ntBASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LINC00116Q8NCU8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AP003122.5-201ENST00000527668 3766 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 FAM35DP-201ENST00000323387 2712 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC092268.1-201ENST00000342691 405 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 SNORD115-8-201ENST00000363856 82 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 RNU1-112P-201ENST00000364401 164 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 SNORD115-38-201ENST00000365037 82 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 MTCO2P33-201ENST00000402100 465 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 RPL23AP48-201ENST00000406913 488 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.595-201ENST00000410403 105 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 RPL23AP36-201ENST00000413895 458 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC138623.1-201ENST00000418060 216 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC099548.1-201ENST00000421443 426 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 POLR2KP2-201ENST00000438155 177 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 MRPS10P1-201ENST00000448483 130 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 RPL23AP3-201ENST00000453844 468 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC074198.2-201ENST00000508153 258 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 CKS1BP7-201ENST00000522230 235 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 RPL21P9-201ENST00000556149 474 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 AC004825.2-201ENST00000616634 455 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LINC00116Q8NCU8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU6-873P-201ENST00000363833 107 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 SNORA9.2-201ENST00000365361 133 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.383-201ENST00000383855 97 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU6-1289P-201ENST00000384431 106 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.506-201ENST00000384494 102 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU6-125P-201ENST00000384505 107 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 MIR196B-201ENST00000384852 84 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNA5SP508-201ENST00000411327 119 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms