Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 SNORA59B-202ENST00000578183 701 ntBASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 AL442067.2-201ENST00000614033 363 ntBASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC197Q8NCU1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 FTH1P25-201ENST00000447665 469 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AL513124.1-201ENST00000450410 614 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AC108938.1-201ENST00000451204 136 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 RPL23AP3-201ENST00000453844 468 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AF235103.2-201ENST00000525753 346 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AP005639.2-201ENST00000527592 928 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 DEFB131C-201ENST00000528817 165 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 RPL17P51-201ENST00000605218 238 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC197Q8NCU1 AC233981.2-201ENST00000611524 1614 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 RNU1-58P-201ENST00000362413 163 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 SNORA32.2-201ENST00000384049 122 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 MIR491-201ENST00000384877 84 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 RPS20P15-201ENST00000412792 311 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 RPL30P16-201ENST00000419341 429 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AL353572.1-201ENST00000442490 417 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 NFU1P2-201ENST00000448700 469 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 MTCO2P30-201ENST00000503662 364 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 RNU6-273P-201ENST00000516937 96 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 POLR3GP2-201ENST00000588366 668 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AC060780.3-201ENST00000589464 80 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 AC084782.3-201ENST00000612282 578 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 MIR7106-201ENST00000612419 65 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC197Q8NCU1 ZNF702P-202ENST00000434269 1966 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 MIR340-201ENST00000362125 95 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU6-160P-201ENST00000384591 107 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 MIR597-201ENST00000384968 97 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 SNORA12.2-201ENST00000391040 156 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC096664.2-201ENST00000411843 406 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AL358453.1-201ENST00000422522 250 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 MTND1P17-201ENST00000448961 204 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AL353705.4-201ENST00000449661 238 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 OR2AQ1P-201ENST00000451972 200 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC087477.1-201ENST00000465747 340 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RPL23AP42-201ENST00000471152 471 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RPL23AP75-201ENST00000491601 451 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC010486.1-201ENST00000511793 424 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU4-49P-201ENST00000516080 140 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU6-358P-201ENST00000516564 75 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 RNU6-566P-201ENST00000516790 107 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 MTND4LP26-201ENST00000518144 282 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC016727.2-201ENST00000603988 621 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC124303.1-201ENST00000605703 360 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC025754.2-201ENST00000606491 432 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC122108.2-201ENST00000611946 526 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC135507.2-201ENST00000612443 309 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC092794.1-201ENST00000612734 582 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC009248.2-201ENST00000619826 254 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 AC008555.8-201ENST00000623602 2168 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CCDC197Q8NCU1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 SNORD114-6-201ENST00000364393 72 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 Z82205.1-201ENST00000428456 297 ntBASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC197Q8NCU1 MTND4LP16-201ENST00000440828 295 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms