Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.85□□□□□ -2.55
LINC00643Q86TS7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.85□□□□□ -2.55
LINC00643Q86TS7 RMST_2.1-201ENST00000617263 136 ntBASIC-0.85□□□□□ -2.55
LINC00643Q86TS7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.85□□□□□ -2.55
LINC00643Q86TS7 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 SNORD56.1-201ENST00000362913 68 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 MIR217-201ENST00000384817 110 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 RPS20P2-201ENST00000402520 389 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 AL365338.1-201ENST00000422282 858 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 MTND4P25-201ENST00000441039 533 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 AC092989.1-201ENST00000481235 277 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 MIR5697-201ENST00000578045 78 ntBASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.86□□□□□ -2.55
LINC00643Q86TS7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 RNU6-14P-201ENST00000384630 106 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 MRPS10P2-201ENST00000431226 381 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AL353997.1-201ENST00000432936 108 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 MTCO3P43-201ENST00000440974 771 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AL583843.1-201ENST00000456070 346 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AC109446.1-201ENST00000566172 220 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AF131215.7-201ENST00000602443 707 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 AC006157.1-201ENST00000611750 366 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 BX322639.1-202ENST00000423987 2213 ntBASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
LINC00643Q86TS7 RNU6-343P-201ENST00000364709 104 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 RNU6-269P-201ENST00000391077 97 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 MIR1185-1-201ENST00000408598 86 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 AL163973.1-201ENST00000484753 577 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 AL354696.1-201ENST00000614652 497 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 AC091925.1-201ENST00000623204 462 ntBASIC-0.88□□□□□ -2.55
LINC00643Q86TS7 SNORD113.3-201ENST00000364630 78 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 RNU6-440P-201ENST00000390882 105 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AL079342.2-201ENST00000403367 482 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 RNA5SP436-201ENST00000516020 115 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AC115990.1-201ENST00000526957 301 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 LRRC6P1-201ENST00000532188 885 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AL157871.3-201ENST00000557231 293 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AC110760.3-201ENST00000598794 467 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AC022217.4-201ENST00000604389 163 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 MIR548AZ-201ENST00000616567 95 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 AL357080.1-201ENST00000617394 239 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 uc_338.36-201ENST00000622331 158 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 MTND4P4-201ENST00000439033 1366 ntBASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.89□□□□□ -2.55
LINC00643Q86TS7 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 RNU6-40P-201ENST00000384254 107 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 RNU4-46P-201ENST00000410818 138 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 MIR6755-201ENST00000619993 66 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 AL445264.1-201ENST00000621719 171 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.9□□□□□ -2.55
LINC00643Q86TS7 MIR330-201ENST00000362196 94 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 RNU6-418P-201ENST00000384035 107 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 SNORA32.3-201ENST00000384772 121 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 MIR196A2-201ENST00000385189 110 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC006026.2-201ENST00000457376 180 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC114811.1-201ENST00000507207 168 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 MTND3P5-201ENST00000512798 333 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 MIR4645-201ENST00000583158 77 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 BNIP3P22-201ENST00000593399 556 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC005229.3-201ENST00000603438 323 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AL670379.3-201ENST00000605040 251 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 uc_338.6-201ENST00000613544 171 ntBASIC-0.91□□□□□ -2.56
LINC00643Q86TS7 AP000568.1-201ENST00000282964 442 ntBASIC-0.92□□□□□ -2.56
LINC00643Q86TS7 SNORD114-28-201ENST00000363610 72 ntBASIC-0.92□□□□□ -2.56
LINC00643Q86TS7 SMIM11P1-201ENST00000369586 178 ntBASIC-0.92□□□□□ -2.56
LINC00643Q86TS7 RNU6-817P-201ENST00000391083 104 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms