Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 AC091144.1-201ENST00000519573 138 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 RMST_6.1-201ENST00000611980 203 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 AL159153.1-201ENST00000619688 317 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 AC007792.1-201ENST00000623023 402 ntBASIC3.2□□□□□ -1.9
UBE3BQ7Z3V4 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 SNORA29-201ENST00000384183 140 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-1222P-201ENST00000384615 107 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 MIR544A-201ENST00000384855 91 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 MIR27B-201ENST00000385129 97 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 MIR628-201ENST00000385229 95 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC009296.1-201ENST00000443146 155 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RN7SL429P-201ENST00000479090 223 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RN7SL489P-201ENST00000486185 223 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RN7SL327P-201ENST00000488659 223 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AF186996.7-201ENST00000492781 209 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 ANXA2P1-201ENST00000505539 926 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC034114.1-201ENST00000520293 285 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC006006.1-201ENST00000603082 144 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AL355877.2-201ENST00000603670 358 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 RN7SL853P-201ENST00000617250 223 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 AC004944.1-201ENST00000517807 3059 ntBASIC3.19□□□□□ -1.9
UBE3BQ7Z3V4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 U3.13-201ENST00000364804 214 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-702P-201ENST00000364982 107 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-142P-201ENST00000384019 107 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 SNORA51.11-201ENST00000384442 131 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-748P-201ENST00000384648 107 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 MT-TG-201ENST00000387429 68 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 SNORA26.3-201ENST00000391119 136 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AC096649.2-201ENST00000416186 393 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AC078809.1-201ENST00000427601 140 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 OSTCP8-201ENST00000445117 448 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AL353705.4-201ENST00000449661 238 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AL442163.3-201ENST00000554110 156 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 MYL12BP1-201ENST00000569826 507 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RPS29P30-201ENST00000600975 111 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AL390123.1-201ENST00000603216 237 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-91P-201ENST00000607774 107 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 AL450472.1-202ENST00000637286 180 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.18□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-238P-201ENST00000363313 106 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 Y_RNA.214-201ENST00000364201 112 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AL590556.1-201ENST00000423231 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 PTGES3P4-201ENST00000426243 356 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AL365496.1-201ENST00000426885 215 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC107032.1-201ENST00000485945 480 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC132942.1-201ENST00000486753 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC016632.1-201ENST00000503994 196 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 SNORA25.11-201ENST00000515935 105 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 AC090617.3-201ENST00000573670 475 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 MIR4435-1-201ENST00000582552 80 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 RAC1P9-201ENST00000604990 392 ntBASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
UBE3BQ7Z3V4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC092268.1-201ENST00000342691 405 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 RNU1-76P-201ENST00000362903 159 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 RNY3P4-201ENST00000384428 101 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 AC087477.1-201ENST00000465747 340 ntBASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
UBE3BQ7Z3V4 HSPE1P4-201ENST00000550617 308 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms