Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 U3.13-201ENST00000364804 214 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MIR218-1-201ENST00000384999 110 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MIR29B2-201ENST00000385055 81 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AL590135.1-201ENST00000422215 156 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC019205.3-201ENST00000424573 156 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC016700.2-201ENST00000446011 156 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 FO393415.2-201ENST00000480085 343 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC015911.1-201ENST00000495111 156 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-307P-201ENST00000516743 106 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 CBX3P8-201ENST00000532412 525 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MRPS36P4-201ENST00000534436 298 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AC018630.3-201ENST00000542637 96 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 HMGB1P24-202ENST00000615653 685 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 PISRT1.1-201ENST00000616930 107 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 MTND4LP32-201ENST00000636111 270 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC073544.1-201ENST00000600110 1595 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RNU4-9P-201ENST00000364951 139 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RNY3P1-201ENST00000365085 102 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RNY3-201ENST00000365484 102 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA36A-201ENST00000384221 132 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 MTCO2P27-201ENST00000420740 428 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 MTCO3P10-201ENST00000455912 772 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RPL23AP75-201ENST00000491601 451 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC021146.2-201ENST00000504736 556 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.675-201ENST00000516389 149 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AP002770.2-201ENST00000543613 532 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC007375.1-201ENST00000554513 578 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 CYP4A27P-201ENST00000567218 190 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AL133255.1-201ENST00000606374 441 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AL050343.2-201ENST00000607338 280 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 AC233981.2-201ENST00000611524 1614 ntBASIC2.67□□□□□ -1.98
SYNE3Q6ZMZ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC012306.1-201ENST00000423267 114 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC008549.1-201ENST00000512900 643 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA48.11-201ENST00000517015 89 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC104581.2-201ENST00000572227 430 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 MIR4273-201ENST00000582824 84 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC010928.2-201ENST00000588017 287 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC133104.2-201ENST00000615272 193 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 AC126177.8-201ENST00000618339 1015 ntBASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.66□□□□□ -1.98
SYNE3Q6ZMZ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SYNE3Q6ZMZ3 MIRLET7G-201ENST00000362280 84 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 RNU6-890P-201ENST00000384121 107 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 U8.10-201ENST00000384260 133 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 SNRPGP7-201ENST00000469016 106 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 SUB1P3-201ENST00000564581 315 ntBASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.65□□□□□ -1.99
SYNE3Q6ZMZ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 SNORD115-8-201ENST00000363856 82 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 Y_RNA.187-201ENST00000363918 113 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 SNORD32B-201ENST00000364460 84 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 RNU4-56P-201ENST00000364700 142 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 SNORD115-38-201ENST00000365037 82 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 RNU6-331P-201ENST00000384724 107 ntBASIC2.64□□□□□ -1.99
SYNE3Q6ZMZ3 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms