Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 SNORA75.3-201ENST00000391231 150 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 RNU4-22P-201ENST00000411058 166 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 HIGD1AP15-201ENST00000416198 280 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 VPS26BP1-201ENST00000417155 755 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AL163973.1-201ENST00000484753 577 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 VN1R87P-201ENST00000596706 487 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AL606834.3-201ENST00000602615 496 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AC026585.1-201ENST00000619582 524 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 AC136475.10-201ENST00000620253 385 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 FRG1KP-201ENST00000623592 341 ntBASIC0.05□□□□□ -2.4
CCDC171Q6TFL3 SNORA72.2-201ENST00000365028 127 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 RNU5E-6P-201ENST00000365574 115 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 RNY1P8-201ENST00000383970 114 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 SNORA36.2-201ENST00000384004 127 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 RNU6-1179P-201ENST00000384667 107 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 SNORA16.2-201ENST00000390991 127 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 RPL22P18-201ENST00000417197 377 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC002486.1-201ENST00000435098 391 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC113347.3-201ENST00000509113 148 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 SNORA31.10-201ENST00000516482 106 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 DEFB130C-202ENST00000530001 230 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 MIR3146-201ENST00000580367 79 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 Z98751.3-201ENST00000604447 521 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC097065.2-201ENST00000608159 533 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC097372.5-201ENST00000623665 376 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC067863.3-201ENST00000624172 122 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AL603839.4-201ENST00000624658 1005 ntBASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.04□□□□□ -2.4
CCDC171Q6TFL3 RNU6-78P-201ENST00000362897 107 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 RNU6-468P-201ENST00000384003 109 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 RNU6-190P-201ENST00000384154 102 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 MIR653-201ENST00000385279 96 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 SNORD41-201ENST00000386967 70 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AL603865.2-201ENST00000401679 213 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 RNA5SP222-201ENST00000411039 105 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 NFU1P2-201ENST00000448700 469 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AP000797.1-201ENST00000478870 387 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 RNU1-86P-201ENST00000516108 154 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 RNU1-107P-201ENST00000516617 154 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AC011195.1-201ENST00000578177 177 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 DEFB131E-202ENST00000602581 683 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 7SK.10-201ENST00000621414 298 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 AC100810.6-201ENST00000638068 285 ntBASIC0.03□□□□□ -2.4
CCDC171Q6TFL3 BX322639.1-202ENST00000423987 2213 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 RNU6-1026P-201ENST00000384465 108 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 MIR1284-201ENST00000408337 120 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 AC244098.3-201ENST00000424803 96 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 RPL23AP30-201ENST00000432419 501 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 HMGB1P29-201ENST00000505659 499 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 AC109445.1-201ENST00000512356 383 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 AP002453.2-201ENST00000533503 320 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 EIF4A1P12-201ENST00000551910 141 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 MIR3923-201ENST00000579521 83 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 PCGEM1.1-201ENST00000613431 131 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.02□□□□□ -2.41
CCDC171Q6TFL3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RNU6-960P-201ENST00000364056 120 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RNU4-76P-201ENST00000364509 141 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RNU4-48P-201ENST00000365559 182 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RNA5SP201-201ENST00000410316 124 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 ELOCP17-201ENST00000414751 326 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AL590135.1-201ENST00000422215 156 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC019205.3-201ENST00000424573 156 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC000111.3-201ENST00000433478 193 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RSL24D1P8-201ENST00000434442 492 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AL606517.2-201ENST00000442855 241 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC016700.2-201ENST00000446011 156 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AL133217.1-201ENST00000450980 425 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 SNRPGP7-201ENST00000469016 106 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC015911.1-201ENST00000495111 156 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RPS23P5-201ENST00000495419 428 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 AC027419.1-201ENST00000522976 328 ntBASIC0.01□□□□□ -2.41
CCDC171Q6TFL3 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms