Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL033523.1-201ENST00000605153 153 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU6-212P-201ENST00000362642 104 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 SNORD115-32-201ENST00000364079 82 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU6-968P-201ENST00000384076 107 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU6-318P-201ENST00000384283 103 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 SNORD116-20-201ENST00000384529 92 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNU2-14P-201ENST00000411053 191 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 COTL1P1-201ENST00000422309 375 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 AP001025.1-201ENST00000486139 332 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 RNA5SP367-201ENST00000516557 118 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 MIR2355-201ENST00000517199 87 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 SNORA31.23-201ENST00000517219 133 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 AL450472.1-202ENST00000637286 180 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 MAPK10-266ENST00000641066 6555 ntBASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF549Q6P9A3 MAPK10-322ENST00000641485 4530 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 MIR335-201ENST00000362173 94 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 SNORA14A-201ENST00000364773 135 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 SNORA20.1-201ENST00000364790 130 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 U8.9-201ENST00000365667 134 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 SNORA29-201ENST00000384183 140 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 U8.10-201ENST00000384260 133 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 U3.26-201ENST00000391236 204 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 SNORD58.1-201ENST00000391313 66 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AL079342.1-201ENST00000401460 267 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 MRPL35P1-201ENST00000404272 572 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC074117.2-201ENST00000417130 397 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC099548.1-201ENST00000421443 426 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 BPY2DP-201ENST00000422208 265 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 EIF1P2-201ENST00000428233 350 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 RPS26P21-201ENST00000475397 348 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 MRPL42P6-201ENST00000486397 371 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 HMGB3P17-201ENST00000504195 649 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC097462.2-201ENST00000504623 481 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 SNORA31.26-201ENST00000517250 137 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AL391261.3-201ENST00000557194 520 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 LARP7P3-201ENST00000579888 337 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 AC240442.1-201ENST00000616055 283 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 U6.104-201ENST00000637979 90 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 LINC02555-201ENST00000563933 1951 ntBASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF549Q6P9A3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 SNORD56.1-201ENST00000362913 68 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 RNU1-139P-201ENST00000391307 165 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AL590135.1-201ENST00000422215 156 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AL591043.1-201ENST00000432461 424 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC107083.1-201ENST00000439643 279 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 HMGN2P10-201ENST00000448085 265 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC006026.2-201ENST00000457376 180 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AP000870.1-201ENST00000472927 406 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 RN7SKP282-201ENST00000516824 299 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC091144.1-201ENST00000519573 138 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC027288.2-201ENST00000553028 243 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 MIR5571-201ENST00000577998 113 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 RMST_6.1-201ENST00000611980 203 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 MIR376A1-201ENST00000616574 68 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF549Q6P9A3 AC103988.1-201ENST00000566382 2177 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 SNORD21-201ENST00000383953 95 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms