Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 EIF4EP2-201ENST00000422816 654 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 MTCO3P46-201ENST00000425787 232 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC096638.1-201ENST00000444678 216 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC069439.1-201ENST00000494739 167 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 MTCO2P30-201ENST00000503662 364 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 MIR1248-201ENST00000629190 106 ntBASIC2.34□□□□□ -2.03
SNX30Q5VWJ9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 RNU6-329P-201ENST00000459618 107 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 AC046134.1-201ENST00000514454 666 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 RNA5SP490-201ENST00000517141 136 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 AC026470.2-201ENST00000561492 181 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 AC090517.1-201ENST00000569307 266 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 RPS3AP23-202ENST00000574601 686 ntBASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX30Q5VWJ9 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MTND3P8-201ENST00000412909 339 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 Z82205.1-201ENST00000428456 297 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MTND1P2-201ENST00000430604 821 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AL121890.1-201ENST00000435457 205 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MTND1P17-201ENST00000448961 204 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 PPP1R2P5-201ENST00000457256 603 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AC093259.1-201ENST00000509755 300 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 RNU6-1088P-201ENST00000516850 104 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MIR4790-201ENST00000577799 79 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 7SK.7-201ENST00000603504 247 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AC022202.1-201ENST00000613515 211 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 AL359697.1-201ENST00000624879 587 ntBASIC2.32□□□□□ -2.04
SNX30Q5VWJ9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 Y_RNA.301-201ENST00000364990 103 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 MIR1261-201ENST00000408659 82 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 RPL30P16-201ENST00000419341 429 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 MRPS36P4-201ENST00000534436 298 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 MIR4742-201ENST00000581069 85 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
SNX30Q5VWJ9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 CBX3P1-201ENST00000325243 554 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 RNU4-9P-201ENST00000364951 139 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 RNU6-596P-201ENST00000365395 98 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 snoU13.15-201ENST00000459407 104 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AC087477.1-201ENST00000465747 340 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 MIR449C-201ENST00000516047 92 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 IGKV3-31-201ENST00000523109 329 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AC005668.1-201ENST00000571142 476 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AC009318.2-201ENST00000610917 651 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 AL359314.1-201ENST00000616913 261 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 SCARNA4-201ENST00000629045 128 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 CASC19-280ENST00000642102 1351 ntBASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX30Q5VWJ9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 MTND5P9-201ENST00000503854 1755 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 RNU6-593P-201ENST00000364716 112 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 RNU6-438P-201ENST00000365561 103 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 FGF7P8-201ENST00000402994 292 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 RN7SKP32-201ENST00000410167 303 ntBASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX30Q5VWJ9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms