| ATP6AP1L | Q52LC2 | AC092944.1-205 | ENST00000494885 | 517 nt | TSL 4 BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RN7SKP265-201 | ENST00000516448 | 223 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | DEFB131C-201 | ENST00000528817 | 165 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC008015.1-201 | ENST00000555505 | 465 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | CYP3A52P-201 | ENST00000563326 | 91 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | PWRN1-203 | ENST00000564898 | 389 nt | TSL 5 BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | CYP4A27P-201 | ENST00000567218 | 190 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP005136.1-201 | ENST00000579765 | 429 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | MIR5583-1-201 | ENST00000580941 | 59 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | MIR4295-201 | ENST00000585286 | 85 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP001836.1-201 | ENST00000604675 | 523 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC064872.1-201 | ENST00000604823 | 1072 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC007494.3-201 | ENST00000624660 | 743 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | MGST1-207 | ENST00000535309 | 1331 nt | TSL 1 (best) BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU6-1097P-201 | ENST00000363586 | 107 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU6-1019P-201 | ENST00000364424 | 107 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNORA18.2-201 | ENST00000383865 | 132 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AL117342.1-201 | ENST00000404861 | 406 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU2-9P-201 | ENST00000410194 | 145 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | ARL5AP1-201 | ENST00000418991 | 388 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC060773.1-201 | ENST00000421698 | 310 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | USP9YP28-201 | ENST00000435142 | 589 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC073910.1-201 | ENST00000445047 | 438 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | ZNF736P8Y-201 | ENST00000451913 | 669 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AL033528.1-201 | ENST00000453780 | 140 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | snoU13.6-201 | ENST00000458785 | 104 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC079140.3-201 | ENST00000511111 | 550 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | TRMT112P2-201 | ENST00000512910 | 132 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC008700.1-202 | ENST00000513657 | 468 nt | TSL 5 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU6-1053P-201 | ENST00000515930 | 101 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNORA18.6-201 | ENST00000516792 | 115 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | IL7-206 | ENST00000520269 | 456 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC060788.1-201 | ENST00000521318 | 469 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP001372.4-201 | ENST00000524889 | 472 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP003072.2-201 | ENST00000527756 | 676 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC022960.1-201 | ENST00000582269 | 348 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | VN1R107P-201 | ENST00000601784 | 209 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC009994.1-201 | ENST00000606889 | 253 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | U91328.3-201 | ENST00000608931 | 354 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC006566.1-201 | ENST00000608943 | 513 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP001506.1-201 | ENST00000615444 | 211 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC079248.2-201 | ENST00000623779 | 326 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SRP54-214 | ENST00000630962 | 162 nt | TSL 5 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 0.98 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | MT-ATP6-201 | ENST00000361899 | 681 nt | APPRIS P1 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | OR2A41P-201 | ENST00000473586 | 105 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC087343.1-201 | ENST00000477341 | 475 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC078980.1-201 | ENST00000485384 | 262 nt | TSL 2 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC008628.2-201 | ENST00000502605 | 298 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RNA5SP384-201 | ENST00000516615 | 116 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNORD60.2-201 | ENST00000516883 | 86 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP003128.1-201 | ENST00000531414 | 448 nt | TSL 2 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | SNHG14-219 | ENST00000553134 | 470 nt | TSL 2 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC025917.1-202 | ENST00000566344 | 635 nt | TSL 5 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AC008147.4-201 | ENST00000617570 | 1204 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | HOXA11-AS1_4.1-201 | ENST00000620901 | 233 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | AP3S1-209 | ENST00000640413 | 489 nt | TSL 5 BASIC | 0.97 | □□□□□ -2.25 | | |
| ATP6AP1L | Q52LC2 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU1-22P-201 | ENST00000363334 | 158 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU6-1093P-201 | ENST00000391194 | 107 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AC092473.1-201 | ENST00000441098 | 221 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | LINC02064-202 | ENST00000507876 | 403 nt | TSL 5 BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | GTF2H2C-212 | ENST00000512736 | 832 nt | TSL 1 (best) BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU6-415P-201 | ENST00000516252 | 97 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AL157911.1-202 | ENST00000554123 | 502 nt | TSL 3 BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | MIR3915-201 | ENST00000578518 | 97 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AL365434.2-201 | ENST00000607979 | 234 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AC122133.1-201 | ENST00000613964 | 233 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | MESTIT1_1.1-201 | ENST00000618871 | 140 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | AC009033.1-201 | ENST00000624279 | 431 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | DEUP1-201 | ENST00000298050 | 2664 nt | APPRIS P1 TSL 5 BASIC | 0.96 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU4-21P-201 | ENST00000362802 | 126 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| ATP6AP1L | Q52LC2 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 0.95 | □□□□□ -2.26 | | |