Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC004223.2-201ENST00000590309 544 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 AC131159.1-201ENST00000621854 213 ntBASIC-0.29□□□□□ -2.46
CCDC58Q4VC31 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 RNU1-76P-201ENST00000362903 159 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 RNU6-650P-201ENST00000365658 111 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 RNU6-190P-201ENST00000384154 102 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 MTCO2P34-201ENST00000421994 607 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AL606517.2-201ENST00000442855 241 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 MTCO1P19-201ENST00000443487 500 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AP000542.1-201ENST00000448473 371 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC109445.1-201ENST00000512356 383 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 RNU2-34P-201ENST00000516534 121 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AP003072.2-201ENST00000527756 676 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 ZNF321P-202ENST00000550843 495 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 MIR3678-201ENST00000578455 94 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC174048.1-201ENST00000603389 144 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC064872.1-201ENST00000604823 1072 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC069545.1-201ENST00000605671 358 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 MIR98-201ENST00000606724 119 ntBASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.3□□□□□ -2.46
CCDC58Q4VC31 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 RNU6-883P-201ENST00000384597 107 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 SNORD105-201ENST00000386910 85 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 RNU4-22P-201ENST00000411058 166 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 HMGN2P34-201ENST00000437647 269 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 OR9P1P-201ENST00000496431 281 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 RNY4P37-201ENST00000516225 96 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 AL445435.1-201ENST00000604232 665 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 U6.42-201ENST00000618440 107 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 RMST_7.1-201ENST00000621935 268 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 AC008133.2-201ENST00000624540 351 ntBASIC-0.31□□□□□ -2.46
CCDC58Q4VC31 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 RNU6-78P-201ENST00000362897 107 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 RNU6V-201ENST00000384105 107 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 AC073261.1-201ENST00000429409 121 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 AC010468.3-201ENST00000508225 458 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 RNU6-917P-201ENST00000516294 104 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 RPL17P51-201ENST00000605218 238 ntBASIC-0.32□□□□□ -2.46
CCDC58Q4VC31 RNU6-418P-201ENST00000384035 107 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 RNA5SP496-201ENST00000391240 109 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 TIMM9P3-201ENST00000428659 274 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 snoU13.18-201ENST00000459483 104 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC022868.1-201ENST00000517767 391 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 MTCO3P15-201ENST00000526563 574 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC104072.1-201ENST00000568817 668 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 MIR4778-201ENST00000577635 80 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC004832.4-201ENST00000608952 331 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 AC006927.4-201ENST00000639187 543 ntBASIC-0.33□□□□□ -2.46
CCDC58Q4VC31 RNU6-384P-201ENST00000364900 104 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 RNU6-815P-201ENST00000384080 113 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 SNORA12.1-201ENST00000390873 148 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 RNA5SP63-201ENST00000391225 112 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AC007547.1-201ENST00000462177 490 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 MIR5708-201ENST00000579723 85 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 MIR6515-201ENST00000619843 57 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 MIR8054-201ENST00000620877 86 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AC078938.1-201ENST00000620993 318 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AC092634.7-201ENST00000621022 103 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AL078595.3-201ENST00000623815 1166 ntBASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.34□□□□□ -2.46
CCDC58Q4VC31 AL390237.1-201ENST00000404226 1415 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC092104.1-201ENST00000497346 1441 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 MIR103A2-201ENST00000362154 78 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 SNORD114-5-201ENST00000362928 70 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 RNU4-56P-201ENST00000364700 142 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 SNORA2.2-201ENST00000365473 135 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 MTCO1P17-201ENST00000411522 491 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 snoU13.25-201ENST00000458945 104 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 RNU6-863P-201ENST00000515989 104 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC008752.3-201ENST00000588113 712 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AL096861.1-201ENST00000610899 123 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC023158.2-201ENST00000614876 543 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC026585.1-201ENST00000619582 524 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AL031667.3-201ENST00000620124 655 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 AC103706.2-201ENST00000638080 240 ntBASIC-0.35□□□□□ -2.47
CCDC58Q4VC31 RNU6-777P-201ENST00000364265 104 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 U8.7-201ENST00000364940 136 ntBASIC-0.36□□□□□ -2.47
CCDC58Q4VC31 AC083799.1-201ENST00000366451 910 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms