Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC131159.1-201ENST00000621854 213 ntBASIC0.36□□□□□ -2.35
RFX7Q2KHR2 AP000943.4-201ENST00000622912 357 ntBASIC0.36□□□□□ -2.35
RFX7Q2KHR2 AC103706.2-201ENST00000638080 240 ntBASIC0.36□□□□□ -2.35
RFX7Q2KHR2 AC099786.3-201ENST00000565735 1410 ntBASIC0.36□□□□□ -2.35
RFX7Q2KHR2 MTND4P12-201ENST00000498999 1377 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 U3.9-201ENST00000363823 204 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 MTCYBP2-201ENST00000407745 171 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 CETN4P-201ENST00000432407 469 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 BTBD7P2-201ENST00000441962 620 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 HMGN1P12-201ENST00000499125 195 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 RNU6-1098P-201ENST00000516772 96 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 APOOP3-201ENST00000536787 586 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 BCRP9-201ENST00000605312 388 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 AC121334.2-201ENST00000605387 271 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 AC092106.3-201ENST00000611308 722 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 AC126544.2-201ENST00000625174 749 ntBASIC0.35□□□□□ -2.35
RFX7Q2KHR2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
RFX7Q2KHR2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AL445523.1-201ENST00000451184 1362 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 Y_RNA.192-201ENST00000363977 102 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 Y_RNA.294-201ENST00000364916 102 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 SNORD116-12-201ENST00000384468 92 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 RNU6-950P-201ENST00000384651 107 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC244670.1-201ENST00000436879 112 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC016925.1-201ENST00000458303 298 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC010531.2-201ENST00000465012 153 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC048334.1-201ENST00000477975 159 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AL163973.1-201ENST00000484753 577 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.34□□□□□ -2.35
RFX7Q2KHR2 MTND2P7-201ENST00000521337 640 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.35
RFX7Q2KHR2 AC012507.3-201ENST00000603556 477 ntBASIC0.34□□□□□ -2.35
RFX7Q2KHR2 Y_RNA.46-201ENST00000362695 102 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 Y_RNA.274-201ENST00000364714 101 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 RNY4P16-201ENST00000364768 94 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 Y_RNA.465-201ENST00000384293 102 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AL136310.1-201ENST00000404926 654 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 HIGD1AP15-201ENST00000416198 280 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AP000797.1-201ENST00000478870 387 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 RPS23P5-201ENST00000495419 428 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AC011406.1-201ENST00000512440 370 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 RNU6-123P-201ENST00000516163 102 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 ZNF321P-202ENST00000550843 495 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 MIR5697-201ENST00000578045 78 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AL606834.3-201ENST00000602615 496 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 RPL17P51-201ENST00000605218 238 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AL139286.2-201ENST00000606838 396 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 AC012409.4-201ENST00000612923 249 ntBASIC0.33□□□□□ -2.36
RFX7Q2KHR2 RNU6-1141P-201ENST00000364520 107 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC011233.1-201ENST00000422812 283 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 GAPDHP17-201ENST00000449858 1001 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU6-377P-201ENST00000515965 102 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU1-86P-201ENST00000516108 154 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU1-107P-201ENST00000516617 154 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU4-77P-201ENST00000516692 156 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC123904.2-201ENST00000548059 300 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC091489.2-201ENST00000566263 604 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC106858.1-201ENST00000637497 429 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 SNORA80D-201ENST00000384488 135 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU6-293P-201ENST00000411259 106 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC060773.1-201ENST00000421698 310 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC010587.2-201ENST00000511727 448 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 SNORD79.1-201ENST00000516069 84 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU6-856P-201ENST00000516959 98 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC008752.3-201ENST00000588113 712 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC010620.1-201ENST00000601088 1102 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL513534.2-201ENST00000603836 250 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL031281.1-201ENST00000604049 488 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX7Q2KHR2 AC108747.1-201ENST00000609508 535 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms