Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC002044.1-201ENST00000606707 158 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AC064807.4-201ENST00000607201 407 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AL133216.2-202ENST00000634512 349 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
FOXF1Q12946 RNU6-414P-201ENST00000363705 104 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 Y_RNA.255-201ENST00000364581 97 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 RNU6-1103P-201ENST00000384150 107 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 RNU6-456P-201ENST00000384493 107 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 RNU6-296P-201ENST00000384608 107 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 RNU6-903P-201ENST00000391270 109 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 MIR1267-201ENST00000408723 78 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 MTCO3P41-201ENST00000414801 328 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC092447.3-201ENST00000426027 686 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.9□□□□□ -2.27
FOXF1Q12946 C8orf59P1-201ENST00000429930 303 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 MTCO2P11-201ENST00000431069 680 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 MTCO2P3-201ENST00000442543 421 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.9□□□□□ -2.27
FOXF1Q12946 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 C1DP4-201ENST00000455429 424 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 SCARNA18-201ENST00000459004 134 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC130509.1-201ENST00000464158 433 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC099513.1-201ENST00000490423 301 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.9□□□□□ -2.27
FOXF1Q12946 ATP5EP1-201ENST00000510257 156 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 MIR449C-201ENST00000516047 92 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC060788.1-201ENST00000521318 469 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.9□□□□□ -2.27
FOXF1Q12946 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.9□□□□□ -2.27
FOXF1Q12946 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.9□□□□□ -2.27
FOXF1Q12946 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.9□□□□□ -2.27
FOXF1Q12946 AC078795.3-201ENST00000602913 472 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 Z98751.3-201ENST00000604447 521 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 Z84480.1-201ENST00000605131 311 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 AC009994.1-201ENST00000606889 253 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.9□□□□□ -2.27
FOXF1Q12946 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.9□□□□□ -2.27
FOXF1Q12946 AL390237.1-201ENST00000404226 1415 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
FOXF1Q12946 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
FOXF1Q12946 SNORD33-201ENST00000362761 85 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 RNU6-552P-201ENST00000362869 119 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 RNU6-827P-201ENST00000365553 106 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 RNU6-439P-201ENST00000384188 106 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.89□□□□□ -2.27
FOXF1Q12946 MTATP6P18-201ENST00000417994 673 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.89□□□□□ -2.27
FOXF1Q12946 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.89□□□□□ -2.27
FOXF1Q12946 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.89□□□□□ -2.27
FOXF1Q12946 AC139712.2-201ENST00000424302 339 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.89□□□□□ -2.27
FOXF1Q12946 FTH1P12-201ENST00000432137 551 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.89□□□□□ -2.27
FOXF1Q12946 SNRPFP3-201ENST00000457792 225 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 HMGN1P13-201ENST00000505795 138 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 ARL2BPP4-201ENST00000506854 471 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.89□□□□□ -2.27
FOXF1Q12946 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.89□□□□□ -2.27
FOXF1Q12946 RNU6-430P-201ENST00000517078 107 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.89□□□□□ -2.27
FOXF1Q12946 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.89□□□□□ -2.27
FOXF1Q12946 MIR4781-201ENST00000585250 76 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
FOXF1Q12946 AL353149.1-201ENST00000610667 244 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 U2.17-201ENST00000611454 95 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 AL359697.1-201ENST00000624879 587 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 SNORA43.4-201ENST00000629559 138 ntBASIC0.89□□□□□ -2.27
FOXF1Q12946 MIR337-201ENST00000362281 93 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 Y_RNA.201-201ENST00000364052 96 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RNU5A-6P-201ENST00000384136 116 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 MIR618-201ENST00000385287 98 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RNU6-360P-201ENST00000390944 104 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RPS26P42-201ENST00000413485 326 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 BX295541.1-201ENST00000417774 250 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
FOXF1Q12946 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXF1Q12946 AL031667.1-201ENST00000440222 725 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC007395.1-201ENST00000451333 677 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RNU7-180P-201ENST00000459240 63 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 MTCO3P38-201ENST00000468910 766 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RPL26P26-201ENST00000480251 434 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.88□□□□□ -2.27
FOXF1Q12946 AC097473.1-201ENST00000508142 408 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXF1Q12946 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 RNU2-34P-201ENST00000516534 121 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 SUMO2P18-201ENST00000518873 252 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXF1Q12946 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXF1Q12946 LRRC34P1-201ENST00000542742 915 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC090115.3-201ENST00000553218 849 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 SUB1P2-201ENST00000556401 297 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC109446.1-201ENST00000566172 220 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AC145350.1-201ENST00000567426 208 ntBASIC0.88□□□□□ -2.27
FOXF1Q12946 AL391840.1-201ENST00000571144 367 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms