Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 TPTE2P5-203ENST00000458118 728 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU7-95P-201ENST00000459222 64 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC083798.1-201ENST00000472671 131 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC132942.1-201ENST00000486753 483 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC005840.1-201ENST00000498412 377 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 RNU6-835P-201ENST00000516974 104 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC109479.2-201ENST00000517842 174 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 COPS8P3-201ENST00000526024 482 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC087441.2-201ENST00000529141 262 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC091135.1-201ENST00000585943 307 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC010900.2-201ENST00000604508 210 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC004908.3-201ENST00000610248 625 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC093783.1-201ENST00000612976 329 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
TNFRSF9Q07011 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
TNFRSF9Q07011 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-1085P-201ENST00000363576 107 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-1322P-201ENST00000364309 107 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU4-66P-201ENST00000365199 138 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU4-20P-201ENST00000365601 151 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-43P-201ENST00000384302 107 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.517-201ENST00000384551 106 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 SNORD73A-201ENST00000386062 65 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 SNORD37.1-201ENST00000390968 65 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.597-201ENST00000410463 100 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-1245P-201ENST00000411130 106 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AC015922.2-201ENST00000435593 184 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 MTND3P16-201ENST00000452205 344 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AK3P2-201ENST00000507976 429 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 SNORA14.1-201ENST00000516113 141 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-965P-201ENST00000516721 96 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 RNU6-667P-201ENST00000517186 102 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 CYCSP27-201ENST00000527643 293 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AL512360.1-201ENST00000555346 234 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 BNIP3P16-201ENST00000589779 534 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AF250324.2-201ENST00000608299 610 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AC092954.2-201ENST00000609103 430 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 AL132822.1-201ENST00000617063 513 ntBASIC1.12□□□□□ -2.23
TNFRSF9Q07011 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TNFRSF9Q07011 SNORD32A-201ENST00000364805 84 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.318-201ENST00000365131 97 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.372-201ENST00000365599 102 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 RNU6-546P-201ENST00000383991 107 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 RNA5SP501-201ENST00000410990 112 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 MTCO3P41-201ENST00000414801 328 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 USP9YP18-201ENST00000425912 695 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 RPS15AP10-201ENST00000432472 382 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 SNAP23P1-201ENST00000433229 246 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC019235.1-201ENST00000503847 207 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC091874.1-201ENST00000511402 339 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 RPL39P5-202ENST00000512505 151 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.693-201ENST00000516641 110 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.704-201ENST00000516851 102 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 RNU1-92P-201ENST00000517017 135 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC069113.1-201ENST00000517763 267 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 CENPUP1-201ENST00000526649 1202 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AP000763.2-201ENST00000540641 163 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC245505.1-201ENST00000556398 224 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 CYP2C61P-201ENST00000604072 290 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AL121757.2-201ENST00000611223 313 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AL359880.1-201ENST00000621879 266 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 MIR1248-201ENST00000629190 106 ntBASIC1.11□□□□□ -2.23
TNFRSF9Q07011 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.11□□□□□ -2.23
TNFRSF9Q07011 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU4-15P-201ENST00000362613 141 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.167-201ENST00000363735 109 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU6-743P-201ENST00000364151 106 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU4-40P-201ENST00000364351 143 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU6-483P-201ENST00000384088 108 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 Y_RNA.481-201ENST00000384373 102 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 SNORA12-201ENST00000391162 147 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 MIR1262-201ENST00000408276 93 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU6-648P-201ENST00000410190 107 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU6-1068P-201ENST00000410958 103 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms