Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC073539.2-201ENST00000597113 165 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 AL513534.2-201ENST00000603836 250 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 RPL17P51-201ENST00000605218 238 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 AC106754.2-201ENST00000623006 233 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
H3F3AP84243 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
H3F3AP84243 ELL2P3-201ENST00000457883 1602 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-1-201ENST00000383898 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-42P-201ENST00000384165 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-36P-201ENST00000384172 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-4P-201ENST00000384205 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-5P-201ENST00000384238 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-3P-201ENST00000384314 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 SNORA24.1-201ENST00000384401 135 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-2-201ENST00000384627 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-9-201ENST00000384776 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-33P-201ENST00000384793 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC078809.1-201ENST00000427601 140 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC000111.3-201ENST00000433478 193 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 MTCO3P18-201ENST00000440206 761 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.4□□□□□ -2.35
H3F3AP84243 AC098869.1-201ENST00000481627 292 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 MTCO3P7-201ENST00000510008 774 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNA5SP337-201ENST00000517007 109 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.4□□□□□ -2.35
H3F3AP84243 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
H3F3AP84243 MTND3P19-201ENST00000603825 345 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC064872.1-201ENST00000604823 1072 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 RNU6-6P-201ENST00000606623 107 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AL139022.2-201ENST00000606934 443 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC009509.4-201ENST00000619202 509 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
H3F3AP84243 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.4□□□□□ -2.35
H3F3AP84243 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-37P-201ENST00000362692 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 snoU2-30.2-201ENST00000362805 70 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-11P-201ENST00000364234 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-25P-201ENST00000383873 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-48P-201ENST00000384161 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-16P-201ENST00000384385 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-505P-201ENST00000384427 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-15P-201ENST00000384534 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-29P-201ENST00000384637 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU6-1031P-201ENST00000384773 107 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU1-139P-201ENST00000391307 165 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RNU2-3P-201ENST00000410144 191 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.39□□□□□ -2.35
H3F3AP84243 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.39□□□□□ -2.35
H3F3AP84243 MTND3P1-201ENST00000441336 220 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 RPS26P48-201ENST00000491713 339 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 AC112206.4-201ENST00000515142 405 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 APOOP3-201ENST00000536787 586 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.39□□□□□ -2.35
H3F3AP84243 AC008521.1-201ENST00000587471 187 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 AL592221.1-201ENST00000605266 382 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 GHRLOS.1-201ENST00000610995 70 ntBASIC0.39□□□□□ -2.35
H3F3AP84243 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
H3F3AP84243 AC092268.1-201ENST00000342691 405 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 RNU6-552P-201ENST00000362869 119 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 U3.4-201ENST00000363352 213 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 RNU6-39P-201ENST00000384344 107 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 SNORA26.3-201ENST00000391119 136 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 RNU6-607P-201ENST00000411283 108 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.38□□□□□ -2.35
H3F3AP84243 GAPDHP17-201ENST00000449858 1001 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.38□□□□□ -2.35
H3F3AP84243 AC116347.2-201ENST00000514912 523 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.38□□□□□ -2.35
H3F3AP84243 RNU2-34P-201ENST00000516534 121 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AC010376.1-201ENST00000522101 334 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
H3F3AP84243 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
H3F3AP84243 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AC112187.2-201ENST00000604345 283 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AC112191.3-201ENST00000604371 277 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AL158211.2-201ENST00000607282 395 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 AC097478.2-201ENST00000610572 514 ntBASIC0.38□□□□□ -2.35
H3F3AP84243 Y_RNA.796-201ENST00000364268 102 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU6-336P-201ENST00000364891 107 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 Y_RNA.799-201ENST00000364992 102 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU6-641P-201ENST00000384006 107 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNA5SP323-201ENST00000391094 133 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 MIR208B-201ENST00000401172 77 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU2-72P-201ENST00000411175 163 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.37□□□□□ -2.35
H3F3AP84243 HMGN2P34-201ENST00000437647 269 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 AC117522.1-201ENST00000509821 380 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNA5SP436-201ENST00000516020 115 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU6-496P-201ENST00000516145 99 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.37□□□□□ -2.35
H3F3AP84243 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.37□□□□□ -2.35
H3F3AP84243 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.37□□□□□ -2.35
H3F3AP84243 MIR4753-201ENST00000585119 83 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 Z98751.3-201ENST00000604447 521 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 AC080013.3-201ENST00000606839 578 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms