Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Y_RNA.561-201ENST00000384694 100 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 MIR153-2-201ENST00000385225 87 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 SNORA12.2-201ENST00000391040 156 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 RPL23AP50-201ENST00000434149 455 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 SNORD109B-201ENST00000458961 67 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 SNORD109A-201ENST00000459128 67 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AC107032.1-201ENST00000485945 480 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.08□□□□□ -2.08
CX3CL1P78423 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.08□□□□□ -2.08
CX3CL1P78423 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.08□□□□□ -2.08
CX3CL1P78423 RNU6-120P-201ENST00000516077 103 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.08□□□□□ -2.08
CX3CL1P78423 CYCSP26-201ENST00000534107 320 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.08□□□□□ -2.08
CX3CL1P78423 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 MIR4446-201ENST00000578505 67 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.08□□□□□ -2.08
CX3CL1P78423 MIR5194-201ENST00000582634 120 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.08□□□□□ -2.08
CX3CL1P78423 AC133104.2-201ENST00000615272 193 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CX3CL1P78423 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CL1P78423 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU4-79P-201ENST00000362764 141 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU6-743P-201ENST00000364151 106 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 Y_RNA.319-201ENST00000365138 92 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU6-234P-201ENST00000365229 104 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 SNORA18.2-201ENST00000383865 132 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU6-17P-201ENST00000384245 107 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU6-611P-201ENST00000384276 104 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 Y_RNA.509-201ENST00000384506 99 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU6-18P-201ENST00000384527 107 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 NDUFB4P4-201ENST00000404822 243 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU2-52P-201ENST00000410680 190 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.07□□□□□ -2.08
CX3CL1P78423 MTCO2P27-201ENST00000420740 428 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC063976.3-201ENST00000426849 329 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CL1P78423 ELOCP24-201ENST00000456370 334 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CL1P78423 AC007215.1-201ENST00000464893 276 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC132942.1-201ENST00000486753 483 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 ANXA2P1-201ENST00000505539 926 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CL1P78423 RNU7-175P-201ENST00000515915 61 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.07□□□□□ -2.08
CX3CL1P78423 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CL1P78423 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
CX3CL1P78423 AC027288.2-201ENST00000553028 243 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.07□□□□□ -2.08
CX3CL1P78423 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CL1P78423 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.07□□□□□ -2.08
CX3CL1P78423 C8orf59P2-201ENST00000603441 271 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AL355802.3-201ENST00000607571 545 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC084781.2-201ENST00000615568 161 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 AC005562.2-201ENST00000618264 111 ntBASIC2.07□□□□□ -2.08
CX3CL1P78423 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CL1P78423 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CL1P78423 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CX3CL1P78423 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CX3CL1P78423 SNORA5B-201ENST00000363786 132 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 SNORD115-8-201ENST00000363856 82 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RNU1-91P-201ENST00000364746 163 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 SNORD115-38-201ENST00000365037 82 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CX3CL1P78423 RNA5SP210-201ENST00000391034 120 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 AF228730.4-201ENST00000421457 183 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 AC236972.2-201ENST00000434979 310 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RPS12P2-201ENST00000439728 269 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RNU7-152P-201ENST00000458982 64 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 AC022493.2-201ENST00000506122 481 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CL1P78423 RNA5SP282-201ENST00000516355 108 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 RNU6-1098P-201ENST00000516772 96 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 Y_RNA.706-201ENST00000516933 99 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CL1P78423 AC026470.2-201ENST00000561492 181 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
CX3CL1P78423 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CX3CL1P78423 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
CX3CL1P78423 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CX3CL1P78423 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CX3CL1P78423 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CX3CL1P78423 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.05□□□□□ -2.08
CX3CL1P78423 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CX3CL1P78423 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CX3CL1P78423 RNU1-76P-201ENST00000362903 159 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RNU6-525P-201ENST00000363685 104 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms