Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.53□□□□□ -2.32
TPM4P67936 AC024995.1-201ENST00000523014 93 ntBASIC0.53□□□□□ -2.32
TPM4P67936 APOOP3-201ENST00000536787 586 ntBASIC0.53□□□□□ -2.32
TPM4P67936 AC023050.3-201ENST00000541142 333 ntBASIC0.53□□□□□ -2.32
TPM4P67936 AC011604.1-201ENST00000545978 196 ntBASIC0.53□□□□□ -2.32
TPM4P67936 AC019226.2-201ENST00000625973 424 ntBASIC0.53□□□□□ -2.32
TPM4P67936 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.53□□□□□ -2.32
TPM4P67936 AC023934.1-201ENST00000574529 2389 ntBASIC0.52□□□□□ -2.33
TPM4P67936 RPS29P13-201ENST00000402041 169 ntBASIC0.52□□□□□ -2.33
TPM4P67936 MIR1283-1-201ENST00000408494 87 ntBASIC0.52□□□□□ -2.33
TPM4P67936 RNU6-757P-201ENST00000410334 100 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AP000275.1-201ENST00000411943 390 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.52□□□□□ -2.33
TPM4P67936 SNAP23P1-201ENST00000433229 246 ntBASIC0.52□□□□□ -2.33
TPM4P67936 GAPDHP17-201ENST00000449858 1001 ntBASIC0.52□□□□□ -2.33
TPM4P67936 SRRM1P2-201ENST00000464531 1192 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AC105185.1-201ENST00000518705 535 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.52□□□□□ -2.33
TPM4P67936 AC008015.1-201ENST00000555505 465 ntBASIC0.52□□□□□ -2.33
TPM4P67936 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
TPM4P67936 AC064807.4-201ENST00000607201 407 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AP001596.2-201ENST00000608410 312 ntBASIC0.52□□□□□ -2.33
TPM4P67936 AP000484.1-201ENST00000620067 1252 ntBASIC0.52□□□□□ -2.33
TPM4P67936 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TPM4P67936 Y_RNA.302-201ENST00000364997 102 ntBASIC0.51□□□□□ -2.33
TPM4P67936 RNU6-45P-201ENST00000384471 107 ntBASIC0.51□□□□□ -2.33
TPM4P67936 SNORD115.1-201ENST00000391109 76 ntBASIC0.51□□□□□ -2.33
TPM4P67936 AC010154.1-201ENST00000425857 269 ntBASIC0.51□□□□□ -2.33
TPM4P67936 AL162395.1-201ENST00000457882 422 ntBASIC0.51□□□□□ -2.33
TPM4P67936 AC010587.1-201ENST00000505809 469 ntBASIC0.51□□□□□ -2.33
TPM4P67936 SNORA31.10-201ENST00000516482 106 ntBASIC0.51□□□□□ -2.33
TPM4P67936 AL390123.1-201ENST00000603216 237 ntBASIC0.51□□□□□ -2.33
TPM4P67936 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TPM4P67936 AC009541.1-201ENST00000438279 2662 ntBASIC0.5□□□□□ -2.33
TPM4P67936 RNU6-562P-201ENST00000362731 107 ntBASIC0.5□□□□□ -2.33
TPM4P67936 RNU5E-10P-201ENST00000363506 118 ntBASIC0.5□□□□□ -2.33
TPM4P67936 RNU6-1235P-201ENST00000384559 107 ntBASIC0.5□□□□□ -2.33
TPM4P67936 MIR208B-201ENST00000401172 77 ntBASIC0.5□□□□□ -2.33
TPM4P67936 Y_RNA.595-201ENST00000410403 105 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC007283.2-201ENST00000424739 197 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC119618.1-201ENST00000434191 222 ntBASIC0.5□□□□□ -2.33
TPM4P67936 RPL37P21-201ENST00000435890 276 ntBASIC0.5□□□□□ -2.33
TPM4P67936 RNU6-498P-201ENST00000459468 107 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC104982.1-201ENST00000478775 574 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC005840.1-201ENST00000498412 377 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
TPM4P67936 RNU6-1146P-201ENST00000516282 102 ntBASIC0.5□□□□□ -2.33
TPM4P67936 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.5□□□□□ -2.33
TPM4P67936 AP003168.1-201ENST00000530091 307 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.5□□□□□ -2.33
TPM4P67936 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.5□□□□□ -2.33
TPM4P67936 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
TPM4P67936 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.5□□□□□ -2.33
TPM4P67936 AL136221.1-201ENST00000621449 509 ntBASIC0.5□□□□□ -2.33
TPM4P67936 Y_RNA.22-201ENST00000362492 102 ntBASIC0.49□□□□□ -2.33
TPM4P67936 RNU4-92P-201ENST00000363783 136 ntBASIC0.49□□□□□ -2.33
TPM4P67936 RNU6-931P-201ENST00000363850 107 ntBASIC0.49□□□□□ -2.33
TPM4P67936 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
TPM4P67936 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM4P67936 AL606517.2-201ENST00000442855 241 ntBASIC0.49□□□□□ -2.33
TPM4P67936 AC112204.1-201ENST00000502591 103 ntBASIC0.49□□□□□ -2.33
TPM4P67936 AC108729.3-201ENST00000513484 108 ntBASIC0.49□□□□□ -2.33
TPM4P67936 RNU6-948P-201ENST00000516374 107 ntBASIC0.49□□□□□ -2.33
TPM4P67936 AC091489.2-201ENST00000566263 604 ntBASIC0.49□□□□□ -2.33
TPM4P67936 MIR4753-201ENST00000585119 83 ntBASIC0.49□□□□□ -2.33
TPM4P67936 Z99289.3-201ENST00000605586 594 ntBASIC0.49□□□□□ -2.33
TPM4P67936 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM4P67936 MIR10B-201ENST00000385011 110 ntBASIC0.48□□□□□ -2.33
TPM4P67936 RN7SKP200-201ENST00000410564 320 ntBASIC0.48□□□□□ -2.33
TPM4P67936 AL035398.1-201ENST00000430869 322 ntBASIC0.48□□□□□ -2.33
TPM4P67936 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.48□□□□□ -2.33
TPM4P67936 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.48□□□□□ -2.33
TPM4P67936 AC104136.1-201ENST00000512969 394 ntBASIC0.48□□□□□ -2.33
TPM4P67936 AC116165.2-201ENST00000616705 206 ntBASIC0.48□□□□□ -2.33
TPM4P67936 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
TPM4P67936 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.48□□□□□ -2.33
TPM4P67936 AC106754.2-201ENST00000623006 233 ntBASIC0.48□□□□□ -2.33
TPM4P67936 RNU6-179P-201ENST00000363350 107 ntBASIC0.47□□□□□ -2.33
TPM4P67936 Y_RNA.287-201ENST00000364853 94 ntBASIC0.47□□□□□ -2.33
TPM4P67936 RNU6-417P-201ENST00000384712 107 ntBASIC0.47□□□□□ -2.33
TPM4P67936 SNORD41-201ENST00000386967 70 ntBASIC0.47□□□□□ -2.33
TPM4P67936 RPS27AP14-201ENST00000422868 454 ntBASIC0.47□□□□□ -2.33
TPM4P67936 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.47□□□□□ -2.33
TPM4P67936 AC008628.2-201ENST00000502605 298 ntBASIC0.47□□□□□ -2.33
TPM4P67936 DEFB131C-201ENST00000528817 165 ntBASIC0.47□□□□□ -2.33
TPM4P67936 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
TPM4P67936 AC008250.2-201ENST00000615261 205 ntBASIC0.47□□□□□ -2.33
TPM4P67936 AL513423.1-201ENST00000621695 132 ntBASIC0.47□□□□□ -2.33
TPM4P67936 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
TPM4P67936 RNU4-68P-201ENST00000364314 141 ntBASIC0.46□□□□□ -2.34
TPM4P67936 SNORA36A-201ENST00000384221 132 ntBASIC0.46□□□□□ -2.34
TPM4P67936 Y_RNA.504-201ENST00000384481 104 ntBASIC0.46□□□□□ -2.34
TPM4P67936 RNA5SP323-201ENST00000391094 133 ntBASIC0.46□□□□□ -2.34
TPM4P67936 TIMM9P3-201ENST00000428659 274 ntBASIC0.46□□□□□ -2.34
TPM4P67936 AL133217.1-201ENST00000450980 425 ntBASIC0.46□□□□□ -2.34
TPM4P67936 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.46□□□□□ -2.34
TPM4P67936 RNU7-21P-201ENST00000459430 62 ntBASIC0.46□□□□□ -2.34
TPM4P67936 AC091874.1-201ENST00000511402 339 ntBASIC0.46□□□□□ -2.34
TPM4P67936 RNA5SP102-201ENST00000516865 106 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms