Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.39□□□□□ -2.35
LSM6P62312 RNU6-948P-201ENST00000516374 107 ntBASIC0.39□□□□□ -2.35
LSM6P62312 RNU6-922P-201ENST00000516753 99 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.39□□□□□ -2.35
LSM6P62312 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.39□□□□□ -2.35
LSM6P62312 MIR4753-201ENST00000585119 83 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AC064872.1-201ENST00000604823 1072 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AC005520.5-201ENST00000613926 164 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AC009509.4-201ENST00000619202 509 ntBASIC0.39□□□□□ -2.35
LSM6P62312 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.39□□□□□ -2.35
LSM6P62312 CASC19-280ENST00000642102 1351 ntBASIC0.39□□□□□ -2.35
LSM6P62312 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
LSM6P62312 Y_RNA.110-201ENST00000363220 99 ntBASIC0.38□□□□□ -2.35
LSM6P62312 RNU6-378P-201ENST00000384324 107 ntBASIC0.38□□□□□ -2.35
LSM6P62312 RNU6-692P-201ENST00000384496 107 ntBASIC0.38□□□□□ -2.35
LSM6P62312 RNU6-1257P-201ENST00000384625 110 ntBASIC0.38□□□□□ -2.35
LSM6P62312 RNU2-3P-201ENST00000410144 191 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AC114491.1-201ENST00000416095 246 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
LSM6P62312 CALM2P2-201ENST00000428512 440 ntBASIC0.38□□□□□ -2.35
LSM6P62312 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.38□□□□□ -2.35
LSM6P62312 RPL39P39-201ENST00000455840 151 ntBASIC0.38□□□□□ -2.35
LSM6P62312 MTCO2P29-201ENST00000465212 189 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.38□□□□□ -2.35
LSM6P62312 MTND3P25-201ENST00000509243 135 ntBASIC0.38□□□□□ -2.35
LSM6P62312 RNU6-276P-201ENST00000516114 96 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AL137100.2-201ENST00000555786 315 ntBASIC0.38□□□□□ -2.35
LSM6P62312 MIR3118-1-201ENST00000581787 76 ntBASIC0.38□□□□□ -2.35
LSM6P62312 AC009994.1-201ENST00000606889 253 ntBASIC0.38□□□□□ -2.35
LSM6P62312 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
LSM6P62312 RNU6-562P-201ENST00000362731 107 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU6-552P-201ENST00000362869 119 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU6-1235P-201ENST00000384559 107 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNA5SP323-201ENST00000391094 133 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
LSM6P62312 MIR1283-1-201ENST00000408494 87 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU2-39P-201ENST00000410604 198 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AL358794.1-201ENST00000445689 381 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AL606662.1-201ENST00000445763 553 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU7-90P-201ENST00000459216 62 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNU6-498P-201ENST00000459468 107 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AC113410.1-201ENST00000505029 247 ntBASIC0.37□□□□□ -2.35
LSM6P62312 RNA5SP337-201ENST00000517007 109 ntBASIC0.37□□□□□ -2.35
LSM6P62312 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.37□□□□□ -2.35
LSM6P62312 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM6P62312 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM6P62312 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM6P62312 MIR5695-201ENST00000579717 85 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AC078795.3-201ENST00000602913 472 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AL357312.1-201ENST00000603879 298 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AL513423.1-201ENST00000621695 132 ntBASIC0.37□□□□□ -2.35
LSM6P62312 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.37□□□□□ -2.35
LSM6P62312 SNORD32A-201ENST00000364805 84 ntBASIC0.36□□□□□ -2.35
LSM6P62312 SNORD116.1-201ENST00000365628 92 ntBASIC0.36□□□□□ -2.35
LSM6P62312 RNU6-163P-201ENST00000384396 106 ntBASIC0.36□□□□□ -2.35
LSM6P62312 RNU6-505P-201ENST00000384427 107 ntBASIC0.36□□□□□ -2.35
LSM6P62312 MED13P1-201ENST00000428342 171 ntBASIC0.36□□□□□ -2.35
LSM6P62312 AC104982.1-201ENST00000478775 574 ntBASIC0.36□□□□□ -2.35
LSM6P62312 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.36□□□□□ -2.35
LSM6P62312 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
LSM6P62312 TPRKBP2-201ENST00000565969 475 ntBASIC0.36□□□□□ -2.35
LSM6P62312 AC008521.1-201ENST00000587471 187 ntBASIC0.36□□□□□ -2.35
LSM6P62312 Z98751.3-201ENST00000604447 521 ntBASIC0.36□□□□□ -2.35
LSM6P62312 AL021368.1-201ENST00000607490 540 ntBASIC0.36□□□□□ -2.35
LSM6P62312 AC116165.2-201ENST00000616705 206 ntBASIC0.36□□□□□ -2.35
LSM6P62312 RNU6-545P-201ENST00000362681 104 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RNU4-76P-201ENST00000364509 141 ntBASIC0.35□□□□□ -2.35
LSM6P62312 Y_RNA.363-201ENST00000365529 113 ntBASIC0.35□□□□□ -2.35
LSM6P62312 SNORA24.1-201ENST00000384401 135 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RNA5SP109-201ENST00000391010 116 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RNU2-72P-201ENST00000411175 163 ntBASIC0.35□□□□□ -2.35
LSM6P62312 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
LSM6P62312 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
LSM6P62312 HMGN2P34-201ENST00000437647 269 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RPS24P1-201ENST00000438550 371 ntBASIC0.35□□□□□ -2.35
LSM6P62312 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.35□□□□□ -2.35
LSM6P62312 RPEP5-201ENST00000441137 268 ntBASIC0.35□□□□□ -2.35
LSM6P62312 NFU1P2-201ENST00000448700 469 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RNU6-229P-201ENST00000516614 102 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.35□□□□□ -2.35
LSM6P62312 AC025627.3-201ENST00000582078 182 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AC073539.2-201ENST00000597113 165 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AL031775.1-201ENST00000607014 887 ntBASIC0.35□□□□□ -2.35
LSM6P62312 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
LSM6P62312 RNU6-336P-201ENST00000364891 107 ntBASIC0.34□□□□□ -2.36
LSM6P62312 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
LSM6P62312 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
LSM6P62312 MIR208B-201ENST00000401172 77 ntBASIC0.34□□□□□ -2.36
LSM6P62312 AL356583.2-201ENST00000426536 280 ntBASIC0.34□□□□□ -2.36
LSM6P62312 MTND3P1-201ENST00000441336 220 ntBASIC0.34□□□□□ -2.36
LSM6P62312 RNU7-21P-201ENST00000459430 62 ntBASIC0.34□□□□□ -2.36
LSM6P62312 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.34□□□□□ -2.36
LSM6P62312 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.34□□□□□ -2.36
LSM6P62312 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.34□□□□□ -2.36
LSM6P62312 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.34□□□□□ -2.36
LSM6P62312 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms