Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 MIR548S-201ENST00000581352 82 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.31□□□□□ -2.04
RPS3AP61247 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 AC018462.2-201ENST00000605375 395 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.31□□□□□ -2.04
RPS3AP61247 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 AC012640.5-201ENST00000623897 319 ntBASIC2.31□□□□□ -2.04
RPS3AP61247 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RPS3AP61247 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPS3AP61247 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
RPS3AP61247 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS3AP61247 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 RNU1-76P-201ENST00000362903 159 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 Y_RNA.99-201ENST00000363138 105 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 SNORA72.1-201ENST00000363485 129 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 SNORD115-32-201ENST00000364079 82 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC103851.1-201ENST00000506833 274 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC026782.1-201ENST00000512952 449 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 RNU5F-4P-201ENST00000516581 114 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC134698.4-201ENST00000523451 826 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 MIR4529-201ENST00000578110 78 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 MIR4513-201ENST00000581077 86 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC005730.3-201ENST00000583067 366 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 7SK.7-201ENST00000603504 247 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 AL359314.1-201ENST00000616913 261 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
RPS3AP61247 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS3AP61247 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS3AP61247 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS3AP61247 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS3AP61247 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RPS3AP61247 SNORD81.2-201ENST00000365153 76 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 Y_RNA.482-201ENST00000384377 111 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 Y_RNA.490-201ENST00000384413 102 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS3AP61247 AC007215.1-201ENST00000464893 276 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 RNU6-1098P-201ENST00000516772 96 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS3AP61247 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS3AP61247 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS3AP61247 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC011494.1-201ENST00000596454 237 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 RMST_6.1-201ENST00000611980 203 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC092794.2-201ENST00000620933 563 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC099654.5-201ENST00000636479 350 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
RPS3AP61247 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
RPS3AP61247 ZNF299P-201ENST00000406845 1804 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
RPS3AP61247 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPS3AP61247 RNU6-1059P-201ENST00000363752 98 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 SNORA18.2-201ENST00000383865 132 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 RNU6-842P-201ENST00000384269 107 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 RNU6-601P-201ENST00000384540 107 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.28□□□□□ -2.04
RPS3AP61247 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.28□□□□□ -2.04
RPS3AP61247 AC243428.1-201ENST00000421099 264 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.28□□□□□ -2.04
RPS3AP61247 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AL035666.1-201ENST00000446195 348 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 snoU13.30-201ENST00000458951 104 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.28□□□□□ -2.04
RPS3AP61247 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 Y_RNA.708-201ENST00000516950 96 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.28□□□□□ -2.04
RPS3AP61247 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AC016727.2-201ENST00000603988 621 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 AL355073.2-201ENST00000612106 557 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.28□□□□□ -2.04
RPS3AP61247 AC005562.2-201ENST00000618264 111 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 TPTEP1-208ENST00000636884 213 ntBASIC2.28□□□□□ -2.04
RPS3AP61247 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
RPS3AP61247 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
RPS3AP61247 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RPS3AP61247 Y_RNA.332-201ENST00000365271 113 ntBASIC2.27□□□□□ -2.05
RPS3AP61247 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
RPS3AP61247 U8.10-201ENST00000384260 133 ntBASIC2.27□□□□□ -2.05
RPS3AP61247 RNU6-1050P-201ENST00000410388 107 ntBASIC2.27□□□□□ -2.05
RPS3AP61247 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
RPS3AP61247 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.27□□□□□ -2.05
RPS3AP61247 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms