Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 U8.2-201ENST00000363156 134 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 MIR520E-201ENST00000384867 87 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 SNORD41-201ENST00000386967 70 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AL035398.1-201ENST00000430869 322 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AC084290.1-201ENST00000434995 374 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AL031274.1-201ENST00000450334 232 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 MTCO2P6-201ENST00000463134 685 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 HMGB1P29-201ENST00000505659 499 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AC116337.1-201ENST00000509680 687 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.4□□□□□ -2.35
HIST1H2BDP58876 Z99497.2-201ENST00000603634 310 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AC009229.3-201ENST00000608056 282 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 MIR8054-201ENST00000620877 86 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AC006001.4-201ENST00000622243 395 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 AL078595.3-201ENST00000623815 1166 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 U6.108-201ENST00000637764 58 ntBASIC0.4□□□□□ -2.35
HIST1H2BDP58876 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HIST1H2BDP58876 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
HIST1H2BDP58876 MTND5P17-201ENST00000418405 1603 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNU6-1287P-201ENST00000362914 107 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNY1P12-201ENST00000364251 105 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNU4-76P-201ENST00000364509 141 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNU6-169P-201ENST00000365336 107 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNU6-1060P-201ENST00000384664 107 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 MIR491-201ENST00000384877 84 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 MIR549A-201ENST00000385268 96 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 SNORA12.1-201ENST00000390873 148 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 snoU109.3-201ENST00000459477 145 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 RNU6-947P-201ENST00000516264 106 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AC018714.1-201ENST00000605028 208 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AL512598.1-201ENST00000610158 273 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AC005562.2-201ENST00000618264 111 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AC009878.1-201ENST00000621819 340 ntBASIC0.39□□□□□ -2.35
HIST1H2BDP58876 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST1H2BDP58876 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 SNORA20.2-201ENST00000383922 131 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 MIR653-201ENST00000385279 96 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 MIR1253-201ENST00000408273 105 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 RNA5SP508-201ENST00000411327 119 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL365184.2-201ENST00000431139 435 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC009474.2-201ENST00000451383 136 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL162395.1-201ENST00000457882 422 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 RNU7-21P-201ENST00000459430 62 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC098869.1-201ENST00000481627 292 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC091951.3-201ENST00000504093 246 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 Y_RNA.672-201ENST00000516289 104 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL391840.1-201ENST00000571144 367 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 MIR3973-201ENST00000579824 107 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 MIR4999-201ENST00000585029 91 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AP000811.1-201ENST00000603803 651 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL157834.3-201ENST00000615543 103 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL513423.1-201ENST00000621695 132 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H2BDP58876 U6.114-201ENST00000636407 96 ntBASIC0.38□□□□□ -2.35
HIST1H2BDP58876 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 RNU6-440P-201ENST00000390882 105 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AL355796.1-201ENST00000406706 323 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC016769.2-201ENST00000414815 475 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AP1B1P2-201ENST00000416196 106 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 MTCO2P23-201ENST00000425216 680 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC004386.2-201ENST00000441858 148 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 NFU1P2-201ENST00000448700 469 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 snoU13.6-201ENST00000458785 104 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC079382.1-201ENST00000493346 557 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 RNA5SP121-201ENST00000516537 101 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 SNORA25.17-201ENST00000517184 124 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H2BDP58876 PCMTD1P2-201ENST00000565017 355 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC005771.1-201ENST00000585581 349 ntBASIC0.37□□□□□ -2.35
HIST1H2BDP58876 AC146944.4-201ENST00000602697 718 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms