Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.419-201ENST00000384041 102 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 MIR95-201ENST00000385072 81 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 Y_RNA.579-201ENST00000390939 94 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 MIR208B-201ENST00000401172 77 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 RNU2-63P-201ENST00000410792 194 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 AC003685.2-201ENST00000422795 395 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN20P56880 Z82188.1-201ENST00000436709 154 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 AL161788.1-201ENST00000441805 169 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN20P56880 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 CKS1BP2-201ENST00000497342 240 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN20P56880 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN20P56880 RNU7-175P-201ENST00000515915 61 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 RNU6-470P-201ENST00000515954 104 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 RNU6-1170P-201ENST00000515974 106 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN20P56880 SUB1P3-201ENST00000564581 315 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN20P56880 AC010928.2-201ENST00000588017 287 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 RMST_6.1-201ENST00000611980 203 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN20P56880 AC135776.4-201ENST00000624300 1904 ntBASIC2.3□□□□□ -2.04
CLDN20P56880 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN20P56880 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN20P56880 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN20P56880 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN20P56880 MIR449A-201ENST00000362113 91 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 RNU6-1032P-201ENST00000384100 107 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 SNORA12.2-201ENST00000391040 156 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 RNU6-700P-201ENST00000391043 107 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 SNORA46.1-201ENST00000391069 153 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN20P56880 MTCYBP10-201ENST00000424905 650 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN20P56880 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 AC023824.2-201ENST00000566185 400 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 AL138963.2-201ENST00000605137 226 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 PCGEM1.1-201ENST00000613431 131 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.29□□□□□ -2.04
CLDN20P56880 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN20P56880 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN20P56880 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN20P56880 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLDN20P56880 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN20P56880 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLDN20P56880 RNU6-490P-201ENST00000362985 107 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 U3.9-201ENST00000363823 204 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 U8.10-201ENST00000384260 133 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 RNU6-378P-201ENST00000384324 107 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 MIR32-201ENST00000384965 70 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 MIR27B-201ENST00000385129 97 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 MIR153-2-201ENST00000385225 87 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.28□□□□□ -2.04
CLDN20P56880 AC027575.1-201ENST00000481064 460 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.28□□□□□ -2.04
CLDN20P56880 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN20P56880 AC109329.2-201ENST00000519658 482 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN20P56880 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN20P56880 MIR5092-201ENST00000583139 88 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN20P56880 AC100812.1-201ENST00000607622 580 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 AC243829.7-201ENST00000633081 225 ntBASIC2.28□□□□□ -2.04
CLDN20P56880 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CLDN20P56880 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN20P56880 RNA5SP125-201ENST00000364843 120 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 Y_RNA.405-201ENST00000383979 100 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 Y_RNA.451-201ENST00000384200 100 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 RNU6-17P-201ENST00000384245 107 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 RNU6-18P-201ENST00000384527 107 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 Y_RNA.524-201ENST00000384564 100 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 Y_RNA.561-201ENST00000384694 100 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 Y_RNA.577-201ENST00000384794 101 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 MIR559-201ENST00000385188 96 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 AC007098.1-201ENST00000420122 367 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN20P56880 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN20P56880 MTCO3P29-201ENST00000432119 779 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 UBE2V1P7-201ENST00000446395 340 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 MIR2053-201ENST00000459295 91 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 RNU6-120P-201ENST00000516077 103 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN20P56880 EIF4A1P12-201ENST00000551910 141 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 AC004584.2-201ENST00000570407 410 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLDN20P56880 AL080274.1-201ENST00000605565 220 ntBASIC2.27□□□□□ -2.05
CLDN20P56880 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
CLDN20P56880 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN20P56880 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CLDN20P56880 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CLDN20P56880 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CLDN20P56880 RNU6-1115P-201ENST00000362490 106 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms