Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
PEX3P56589 CYCSP49-201ENST00000420810 319 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.97□□□□□ -2.09
PEX3P56589 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
PEX3P56589 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.97□□□□□ -2.09
PEX3P56589 U8.21-201ENST00000459536 136 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC104564.1-201ENST00000493028 407 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC018710.1-201ENST00000506509 158 ntBASIC1.97□□□□□ -2.09
PEX3P56589 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
PEX3P56589 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.97□□□□□ -2.09
PEX3P56589 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.97□□□□□ -2.09
PEX3P56589 AC016256.1-201ENST00000547971 354 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.97□□□□□ -2.09
PEX3P56589 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.97□□□□□ -2.09
PEX3P56589 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
PEX3P56589 MIR6715A-201ENST00000615929 79 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC008121.3-201ENST00000618726 433 ntBASIC1.97□□□□□ -2.09
PEX3P56589 MIR7843-201ENST00000622274 79 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
PEX3P56589 AL133216.2-202ENST00000634512 349 ntBASIC1.97□□□□□ -2.09
PEX3P56589 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
PEX3P56589 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PEX3P56589 SNORD32B-201ENST00000364460 84 ntBASIC1.96□□□□□ -2.1
PEX3P56589 SNORA36A-201ENST00000384221 132 ntBASIC1.96□□□□□ -2.1
PEX3P56589 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
PEX3P56589 MIR29B2-201ENST00000385055 81 ntBASIC1.96□□□□□ -2.1
PEX3P56589 MTND3P9-201ENST00000429526 346 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AL591806.2-201ENST00000433122 173 ntBASIC1.96□□□□□ -2.1
PEX3P56589 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
PEX3P56589 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.96□□□□□ -2.1
PEX3P56589 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.96□□□□□ -2.1
PEX3P56589 AC130509.1-201ENST00000464158 433 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AC016632.1-201ENST00000503994 196 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AC005741.1-201ENST00000511094 432 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.96□□□□□ -2.1
PEX3P56589 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.96□□□□□ -2.1
PEX3P56589 RNA5SP454-201ENST00000517231 127 ntBASIC1.96□□□□□ -2.1
PEX3P56589 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.96□□□□□ -2.1
PEX3P56589 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.96□□□□□ -2.1
PEX3P56589 AC007375.1-201ENST00000554513 578 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.96□□□□□ -2.1
PEX3P56589 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.96□□□□□ -2.1
PEX3P56589 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.96□□□□□ -2.1
PEX3P56589 MIR8076-201ENST00000611401 83 ntBASIC1.96□□□□□ -2.1
PEX3P56589 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
PEX3P56589 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.96□□□□□ -2.1
PEX3P56589 CASC19-280ENST00000642102 1351 ntBASIC1.96□□□□□ -2.1
PEX3P56589 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.95□□□□□ -2.1
PEX3P56589 RNU5B-2P-201ENST00000363036 113 ntBASIC1.95□□□□□ -2.1
PEX3P56589 Y_RNA.151-201ENST00000363566 112 ntBASIC1.95□□□□□ -2.1
PEX3P56589 SNORA3A-201ENST00000364113 130 ntBASIC1.95□□□□□ -2.1
PEX3P56589 RNU6-784P-201ENST00000384330 106 ntBASIC1.95□□□□□ -2.1
PEX3P56589 MT-TL1-201ENST00000386347 75 ntBASIC1.95□□□□□ -2.1
PEX3P56589 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
PEX3P56589 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.95□□□□□ -2.1
PEX3P56589 AL590135.1-201ENST00000422215 156 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AC019205.3-201ENST00000424573 156 ntBASIC1.95□□□□□ -2.1
PEX3P56589 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.95□□□□□ -2.1
PEX3P56589 AC016700.2-201ENST00000446011 156 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.95□□□□□ -2.1
PEX3P56589 AC015911.1-201ENST00000495111 156 ntBASIC1.95□□□□□ -2.1
PEX3P56589 RNU6-566P-201ENST00000516790 107 ntBASIC1.95□□□□□ -2.1
PEX3P56589 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
PEX3P56589 Z98751.3-201ENST00000604447 521 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
PEX3P56589 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AC005520.5-201ENST00000613926 164 ntBASIC1.95□□□□□ -2.1
PEX3P56589 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AL132822.1-201ENST00000617063 513 ntBASIC1.95□□□□□ -2.1
PEX3P56589 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
PEX3P56589 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.95□□□□□ -2.1
PEX3P56589 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PEX3P56589 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PEX3P56589 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PEX3P56589 Y_RNA.166-201ENST00000363730 102 ntBASIC1.94□□□□□ -2.1
PEX3P56589 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
PEX3P56589 SNORA32.2-201ENST00000384049 122 ntBASIC1.94□□□□□ -2.1
PEX3P56589 MTND3P8-201ENST00000412909 339 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.94□□□□□ -2.1
PEX3P56589 DAP3P1-201ENST00000441522 278 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC079354.2-201ENST00000453523 154 ntBASIC1.94□□□□□ -2.1
PEX3P56589 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.94□□□□□ -2.1
PEX3P56589 NDUFA5P6-201ENST00000542110 379 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.94□□□□□ -2.1
PEX3P56589 AC021231.3-201ENST00000558497 370 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC233702.2-202ENST00000562547 291 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC104984.5-201ENST00000586878 94 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
PEX3P56589 AL161423.1-201ENST00000613700 262 ntBASIC1.94□□□□□ -2.1
PEX3P56589 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.94□□□□□ -2.1
PEX3P56589 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
PEX3P56589 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PEX3P56589 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
PEX3P56589 AC009541.1-201ENST00000438279 2662 ntBASIC1.93□□□□□ -2.1
PEX3P56589 SNORD50.1-201ENST00000362987 71 ntBASIC1.93□□□□□ -2.1
PEX3P56589 Y_RNA.339-201ENST00000365325 102 ntBASIC1.93□□□□□ -2.1
PEX3P56589 RNU6-1286P-201ENST00000383871 107 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms