Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA26.9-201ENST00000391322 122 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AL030996.1-201ENST00000411430 235 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.64□□□□□ -2.15
LIM2P55344 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.64□□□□□ -2.15
LIM2P55344 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC007677.1-201ENST00000445757 515 ntBASIC1.64□□□□□ -2.15
LIM2P55344 RPL23AP3-201ENST00000453844 468 ntBASIC1.64□□□□□ -2.15
LIM2P55344 RNU1-131P-201ENST00000458943 161 ntBASIC1.64□□□□□ -2.15
LIM2P55344 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.64□□□□□ -2.15
LIM2P55344 AC083904.1-201ENST00000487828 231 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC091435.1-201ENST00000505442 584 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC104576.1-201ENST00000524225 88 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
LIM2P55344 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.64□□□□□ -2.15
LIM2P55344 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.64□□□□□ -2.15
LIM2P55344 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
LIM2P55344 CTHRC1P1-201ENST00000605383 469 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC012557.2-201ENST00000605919 418 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AC104458.1-201ENST00000608243 463 ntBASIC1.64□□□□□ -2.15
LIM2P55344 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AL359697.1-201ENST00000624879 587 ntBASIC1.64□□□□□ -2.15
LIM2P55344 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LIM2P55344 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
LIM2P55344 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.63□□□□□ -2.15
LIM2P55344 Y_RNA.38-201ENST00000362617 102 ntBASIC1.63□□□□□ -2.15
LIM2P55344 Y_RNA.212-201ENST00000364177 102 ntBASIC1.63□□□□□ -2.15
LIM2P55344 RNU6-1317P-201ENST00000364582 104 ntBASIC1.63□□□□□ -2.15
LIM2P55344 RNU6-784P-201ENST00000384330 106 ntBASIC1.63□□□□□ -2.15
LIM2P55344 RNU6-933P-201ENST00000384424 107 ntBASIC1.63□□□□□ -2.15
LIM2P55344 RNU6-160P-201ENST00000384591 107 ntBASIC1.63□□□□□ -2.15
LIM2P55344 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LIM2P55344 RNU2-40P-201ENST00000410833 196 ntBASIC1.63□□□□□ -2.15
LIM2P55344 EIF4EP2-201ENST00000422816 654 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.63□□□□□ -2.15
LIM2P55344 AC096920.1-201ENST00000423991 241 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.63□□□□□ -2.15
LIM2P55344 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.63□□□□□ -2.15
LIM2P55344 FTH1P25-201ENST00000447665 469 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.63□□□□□ -2.15
LIM2P55344 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.63□□□□□ -2.15
LIM2P55344 AC021146.2-201ENST00000504736 556 ntBASIC1.63□□□□□ -2.15
LIM2P55344 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.63□□□□□ -2.15
LIM2P55344 FAM206BP-201ENST00000510179 541 ntBASIC1.63□□□□□ -2.15
LIM2P55344 MIR514B-201ENST00000516774 80 ntBASIC1.63□□□□□ -2.15
LIM2P55344 RNA5SP490-201ENST00000517141 136 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.63□□□□□ -2.15
LIM2P55344 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.63□□□□□ -2.15
LIM2P55344 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LIM2P55344 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AL133215.3-201ENST00000609801 448 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AL627230.6-201ENST00000611129 280 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AC137590.2-201ENST00000619709 240 ntBASIC1.63□□□□□ -2.15
LIM2P55344 AC068137.4-201ENST00000638485 296 ntBASIC1.63□□□□□ -2.15
LIM2P55344 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.63□□□□□ -2.15
LIM2P55344 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LIM2P55344 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
LIM2P55344 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LIM2P55344 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
LIM2P55344 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
LIM2P55344 RNU5B-2P-201ENST00000363036 113 ntBASIC1.62□□□□□ -2.15
LIM2P55344 Y_RNA.135-201ENST00000363439 95 ntBASIC1.62□□□□□ -2.15
LIM2P55344 Y_RNA.157-201ENST00000363638 102 ntBASIC1.62□□□□□ -2.15
LIM2P55344 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIM2P55344 SNORA12-201ENST00000391162 147 ntBASIC1.62□□□□□ -2.15
LIM2P55344 RNU6-325P-201ENST00000411132 105 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC123900.1-201ENST00000420390 96 ntBASIC1.62□□□□□ -2.15
LIM2P55344 USP9YP28-201ENST00000435142 589 ntBASIC1.62□□□□□ -2.15
LIM2P55344 DAP3P1-201ENST00000441522 278 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AL035666.1-201ENST00000446195 348 ntBASIC1.62□□□□□ -2.15
LIM2P55344 RNU7-66P-201ENST00000459469 62 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC096745.1-201ENST00000509945 370 ntBASIC1.62□□□□□ -2.15
LIM2P55344 RNU6-1332P-201ENST00000516666 104 ntBASIC1.62□□□□□ -2.15
LIM2P55344 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.62□□□□□ -2.15
LIM2P55344 AC026470.2-201ENST00000561492 181 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC109446.1-201ENST00000566172 220 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC104581.2-201ENST00000572227 430 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC008749.1-201ENST00000597650 306 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
LIM2P55344 AL022345.1-201ENST00000607292 135 ntBASIC1.62□□□□□ -2.15
LIM2P55344 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.62□□□□□ -2.15
LIM2P55344 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
LIM2P55344 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
LIM2P55344 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LIM2P55344 Y_RNA.6-201ENST00000362350 114 ntBASIC1.61□□□□□ -2.15
LIM2P55344 SNORD31B-201ENST00000364977 69 ntBASIC1.61□□□□□ -2.15
LIM2P55344 RNU6-877P-201ENST00000383868 107 ntBASIC1.61□□□□□ -2.15
LIM2P55344 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
LIM2P55344 MIR208B-201ENST00000401172 77 ntBASIC1.61□□□□□ -2.15
LIM2P55344 Y_RNA.615-201ENST00000410769 117 ntBASIC1.61□□□□□ -2.15
LIM2P55344 VN1R36P-201ENST00000414936 291 ntBASIC1.61□□□□□ -2.15
LIM2P55344 AC009161.1-201ENST00000417306 376 ntBASIC1.61□□□□□ -2.15
LIM2P55344 CYCSP49-201ENST00000420810 319 ntBASIC1.61□□□□□ -2.15
LIM2P55344 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.61□□□□□ -2.15
LIM2P55344 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.61□□□□□ -2.15
LIM2P55344 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.61□□□□□ -2.15
LIM2P55344 HMGN2P18-201ENST00000450680 270 ntBASIC1.61□□□□□ -2.15
LIM2P55344 AMD1P1-201ENST00000457220 922 ntBASIC1.61□□□□□ -2.15
LIM2P55344 PMCHL2-203ENST00000457791 237 ntBASIC1.61□□□□□ -2.15
LIM2P55344 RPL39P5-202ENST00000512505 151 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms