Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH6P55285 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH6P55285 AC145350.1-201ENST00000567426 208 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.31□□□□□ -2.2
CDH6P55285 MTATP6P3-201ENST00000581686 676 ntBASIC1.31□□□□□ -2.2
CDH6P55285 VN1R80P-201ENST00000597126 338 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC068790.2-201ENST00000602601 557 ntBASIC1.31□□□□□ -2.2
CDH6P55285 Z98751.3-201ENST00000604447 521 ntBASIC1.31□□□□□ -2.2
CDH6P55285 RNU6-85P-201ENST00000605989 107 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC072046.2-201ENST00000618366 268 ntBASIC1.31□□□□□ -2.2
CDH6P55285 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CDH6P55285 AC136475.10-201ENST00000620253 385 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AL159152.1-201ENST00000635019 2587 ntBASIC1.31□□□□□ -2.2
CDH6P55285 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.3□□□□□ -2.2
CDH6P55285 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AC010615.1-201ENST00000594254 1764 ntBASIC1.3□□□□□ -2.2
CDH6P55285 RNU6-1026P-201ENST00000384465 108 ntBASIC1.3□□□□□ -2.2
CDH6P55285 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH6P55285 MTATP6P18-201ENST00000417994 673 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH6P55285 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH6P55285 AC132479.1-201ENST00000449160 144 ntBASIC1.3□□□□□ -2.2
CDH6P55285 RNU7-167P-201ENST00000459160 62 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AC008628.2-201ENST00000502605 298 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AC079140.3-201ENST00000511111 550 ntBASIC1.3□□□□□ -2.2
CDH6P55285 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH6P55285 AC105417.1-201ENST00000514691 285 ntBASIC1.3□□□□□ -2.2
CDH6P55285 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH6P55285 AL137161.1-201ENST00000532231 390 ntBASIC1.3□□□□□ -2.2
CDH6P55285 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH6P55285 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH6P55285 HIF1AP1-201ENST00000553642 175 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AL391840.1-201ENST00000571144 367 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
CDH6P55285 U2.17-201ENST00000611454 95 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AC005520.5-201ENST00000613926 164 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
CDH6P55285 AL136221.1-201ENST00000621449 509 ntBASIC1.3□□□□□ -2.2
CDH6P55285 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
CDH6P55285 RNU1-76P-201ENST00000362903 159 ntBASIC1.29□□□□□ -2.2
CDH6P55285 Y_RNA.399-201ENST00000383955 105 ntBASIC1.29□□□□□ -2.2
CDH6P55285 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
CDH6P55285 RNU6-903P-201ENST00000391270 109 ntBASIC1.29□□□□□ -2.2
CDH6P55285 RNU2-7P-201ENST00000410794 178 ntBASIC1.29□□□□□ -2.2
CDH6P55285 MTCYBP8-201ENST00000422855 651 ntBASIC1.29□□□□□ -2.2
CDH6P55285 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH6P55285 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CDH6P55285 RPS23P5-201ENST00000495419 428 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH6P55285 RNA5SP458-201ENST00000516188 119 ntBASIC1.29□□□□□ -2.2
CDH6P55285 RNA5SP481-201ENST00000516814 122 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH6P55285 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
CDH6P55285 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDH6P55285 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH6P55285 AC009994.1-201ENST00000606889 253 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AC064807.4-201ENST00000607201 407 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AP001596.2-201ENST00000608410 312 ntBASIC1.29□□□□□ -2.2
CDH6P55285 MIR8063-201ENST00000621930 81 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AL450472.1-202ENST00000637286 180 ntBASIC1.29□□□□□ -2.2
CDH6P55285 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
CDH6P55285 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
CDH6P55285 RNU6-1120P-201ENST00000362988 108 ntBASIC1.28□□□□□ -2.2
CDH6P55285 Y_RNA.159-201ENST00000363674 87 ntBASIC1.28□□□□□ -2.2
CDH6P55285 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
CDH6P55285 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
CDH6P55285 RNU6-517P-201ENST00000384362 110 ntBASIC1.28□□□□□ -2.2
CDH6P55285 SNORD73A-201ENST00000386062 65 ntBASIC1.28□□□□□ -2.2
CDH6P55285 MIR208B-201ENST00000401172 77 ntBASIC1.28□□□□□ -2.2
CDH6P55285 ARL5AP1-201ENST00000418991 388 ntBASIC1.28□□□□□ -2.2
CDH6P55285 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH6P55285 AL356010.1-201ENST00000456364 102 ntBASIC1.28□□□□□ -2.2
CDH6P55285 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.28□□□□□ -2.2
CDH6P55285 RPL39P5-202ENST00000512505 151 ntBASIC1.28□□□□□ -2.2
CDH6P55285 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
CDH6P55285 AC073114.1-201ENST00000612027 490 ntBASIC1.28□□□□□ -2.2
CDH6P55285 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.28□□□□□ -2.2
CDH6P55285 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.28□□□□□ -2.2
CDH6P55285 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
CDH6P55285 SNORA43.4-201ENST00000629559 138 ntBASIC1.28□□□□□ -2.2
CDH6P55285 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
CDH6P55285 Y_RNA.132-201ENST00000363421 102 ntBASIC1.27□□□□□ -2.21
CDH6P55285 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AP000275.1-201ENST00000411943 390 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC245047.4-201ENST00000433189 144 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
CDH6P55285 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH6P55285 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.27□□□□□ -2.21
CDH6P55285 RNU7-63P-201ENST00000459054 62 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
CDH6P55285 RNA5SP437-201ENST00000517249 129 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH6P55285 SNORA59B-202ENST00000578183 701 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AP005136.1-201ENST00000579765 429 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AC109347.2-201ENST00000610220 349 ntBASIC1.27□□□□□ -2.21
CDH6P55285 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.26□□□□□ -2.21
CDH6P55285 AC012306.1-201ENST00000423267 114 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms