Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC121333.1-201ENST00000567488 2709 ntBASIC1.93□□□□□ -2.1
VCPP55072 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.92□□□□□ -2.1
VCPP55072 Y_RNA.9-201ENST00000362354 101 ntBASIC1.92□□□□□ -2.1
VCPP55072 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
VCPP55072 Y_RNA.191-201ENST00000363972 113 ntBASIC1.92□□□□□ -2.1
VCPP55072 RNU6-522P-201ENST00000364497 107 ntBASIC1.92□□□□□ -2.1
VCPP55072 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
VCPP55072 SNORD32A-201ENST00000364805 84 ntBASIC1.92□□□□□ -2.1
VCPP55072 Y_RNA.402-201ENST00000383972 102 ntBASIC1.92□□□□□ -2.1
VCPP55072 RNU6-1215P-201ENST00000384441 102 ntBASIC1.92□□□□□ -2.1
VCPP55072 MIR29B2-201ENST00000385055 81 ntBASIC1.92□□□□□ -2.1
VCPP55072 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VCPP55072 SNORA67.5-201ENST00000391036 107 ntBASIC1.92□□□□□ -2.1
VCPP55072 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
VCPP55072 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
VCPP55072 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.92□□□□□ -2.1
VCPP55072 RPS15AP10-201ENST00000432472 382 ntBASIC1.92□□□□□ -2.1
VCPP55072 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.92□□□□□ -2.1
VCPP55072 PPP1R2P5-201ENST00000457256 603 ntBASIC1.92□□□□□ -2.1
VCPP55072 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.92□□□□□ -2.1
VCPP55072 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.92□□□□□ -2.1
VCPP55072 AP005597.4-201ENST00000526762 229 ntBASIC1.92□□□□□ -2.1
VCPP55072 AC109635.3-201ENST00000529536 185 ntBASIC1.92□□□□□ -2.1
VCPP55072 AC025423.5-201ENST00000550230 219 ntBASIC1.92□□□□□ -2.1
VCPP55072 AL356157.2-201ENST00000605122 111 ntBASIC1.92□□□□□ -2.1
VCPP55072 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VCPP55072 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VCPP55072 AC139792.2-201ENST00000624218 587 ntBASIC1.92□□□□□ -2.1
VCPP55072 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VCPP55072 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VCPP55072 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VCPP55072 AL391987.6-201ENST00000305671 199 ntBASIC1.91□□□□□ -2.1
VCPP55072 RNU6-451P-201ENST00000362921 107 ntBASIC1.91□□□□□ -2.1
VCPP55072 SNORD114-26-201ENST00000363543 72 ntBASIC1.91□□□□□ -2.1
VCPP55072 RNY1-201ENST00000364228 113 ntBASIC1.91□□□□□ -2.1
VCPP55072 RNU6-392P-201ENST00000364926 101 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
VCPP55072 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
VCPP55072 USP9YP18-201ENST00000425912 695 ntBASIC1.91□□□□□ -2.1
VCPP55072 C8orf59P1-201ENST00000429930 303 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC244670.1-201ENST00000436879 112 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC083904.1-201ENST00000487828 231 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC022447.4-201ENST00000504053 364 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.91□□□□□ -2.1
VCPP55072 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.91□□□□□ -2.1
VCPP55072 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.91□□□□□ -2.1
VCPP55072 MTND1P35-201ENST00000526739 508 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC007375.1-201ENST00000554513 578 ntBASIC1.91□□□□□ -2.1
VCPP55072 AP001836.1-201ENST00000604675 523 ntBASIC1.91□□□□□ -2.1
VCPP55072 AC064836.2-201ENST00000609491 462 ntBASIC1.91□□□□□ -2.1
VCPP55072 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
VCPP55072 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.91□□□□□ -2.1
VCPP55072 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.9□□□□□ -2.1
VCPP55072 AP000560.1-201ENST00000624150 1937 ntBASIC1.9□□□□□ -2.11
VCPP55072 RNY4P14-201ENST00000363656 96 ntBASIC1.9□□□□□ -2.11
VCPP55072 RNU6-944P-201ENST00000364023 107 ntBASIC1.9□□□□□ -2.11
VCPP55072 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VCPP55072 RNU2-32P-201ENST00000411193 191 ntBASIC1.9□□□□□ -2.11
VCPP55072 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.9□□□□□ -2.11
VCPP55072 AC078809.1-201ENST00000427601 140 ntBASIC1.9□□□□□ -2.11
VCPP55072 MTND1P34-201ENST00000438556 671 ntBASIC1.9□□□□□ -2.11
VCPP55072 AL359672.1-201ENST00000442302 409 ntBASIC1.9□□□□□ -2.11
VCPP55072 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.9□□□□□ -2.11
VCPP55072 RNU6-1037P-201ENST00000459571 107 ntBASIC1.9□□□□□ -2.11
VCPP55072 TOMM22P6-201ENST00000465035 409 ntBASIC1.9□□□□□ -2.11
VCPP55072 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.9□□□□□ -2.11
VCPP55072 HSPE1P4-201ENST00000550617 308 ntBASIC1.9□□□□□ -2.11
VCPP55072 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.9□□□□□ -2.11
VCPP55072 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.9□□□□□ -2.11
VCPP55072 MIR4452-201ENST00000583004 71 ntBASIC1.9□□□□□ -2.11
VCPP55072 BNIP3P25-201ENST00000596023 559 ntBASIC1.9□□□□□ -2.11
VCPP55072 AL078603.1-201ENST00000603824 313 ntBASIC1.9□□□□□ -2.11
VCPP55072 AC018889.1-201ENST00000605372 397 ntBASIC1.9□□□□□ -2.11
VCPP55072 uc_338.5-201ENST00000611839 155 ntBASIC1.9□□□□□ -2.11
VCPP55072 AC063943.3-201ENST00000615562 356 ntBASIC1.9□□□□□ -2.11
VCPP55072 U4.5-201ENST00000617137 123 ntBASIC1.9□□□□□ -2.11
VCPP55072 MIR6734-201ENST00000621166 68 ntBASIC1.9□□□□□ -2.11
VCPP55072 SNORD98-201ENST00000636377 67 ntBASIC1.9□□□□□ -2.11
VCPP55072 Y_RNA.256-201ENST00000364594 104 ntBASIC1.89□□□□□ -2.11
VCPP55072 Y_RNA.373-201ENST00000365600 103 ntBASIC1.89□□□□□ -2.11
VCPP55072 RNU6-1329P-201ENST00000365664 107 ntBASIC1.89□□□□□ -2.11
VCPP55072 RNU6-546P-201ENST00000383991 107 ntBASIC1.89□□□□□ -2.11
VCPP55072 Y_RNA.450-201ENST00000384198 113 ntBASIC1.89□□□□□ -2.11
VCPP55072 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
VCPP55072 Y_RNA.597-201ENST00000410463 100 ntBASIC1.89□□□□□ -2.11
VCPP55072 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
VCPP55072 Y_RNA.615-201ENST00000410769 117 ntBASIC1.89□□□□□ -2.11
VCPP55072 MTCO1P21-201ENST00000416634 589 ntBASIC1.89□□□□□ -2.11
VCPP55072 AL590135.1-201ENST00000422215 156 ntBASIC1.89□□□□□ -2.11
VCPP55072 AC019205.3-201ENST00000424573 156 ntBASIC1.89□□□□□ -2.11
VCPP55072 RPL23AP95-201ENST00000426806 265 ntBASIC1.89□□□□□ -2.11
VCPP55072 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.89□□□□□ -2.11
VCPP55072 MRPS10P2-201ENST00000431226 381 ntBASIC1.89□□□□□ -2.11
VCPP55072 AC016700.2-201ENST00000446011 156 ntBASIC1.89□□□□□ -2.11
VCPP55072 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.89□□□□□ -2.11
VCPP55072 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.89□□□□□ -2.11
VCPP55072 AC015911.1-201ENST00000495111 156 ntBASIC1.89□□□□□ -2.11
VCPP55072 RPL39P5-202ENST00000512505 151 ntBASIC1.89□□□□□ -2.11
VCPP55072 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
VCPP55072 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms