Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 RNU6-858P-201ENST00000362436 107 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RNU6-527P-201ENST00000363425 104 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RNU6-799P-201ENST00000363567 107 ntBASIC3.02□□□□□ -1.93
CLK3P49761 Y_RNA.286-201ENST00000364813 102 ntBASIC3.02□□□□□ -1.93
CLK3P49761 SNORD50.2-201ENST00000365465 70 ntBASIC3.02□□□□□ -1.93
CLK3P49761 Z98749.2-208ENST00000381646 500 ntBASIC3.02□□□□□ -1.93
CLK3P49761 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RNU2-61P-201ENST00000411069 191 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RPL19P1-201ENST00000411635 428 ntBASIC3.02□□□□□ -1.93
CLK3P49761 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC005300.1-201ENST00000428401 373 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RPS15AP5-201ENST00000436276 388 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AL358232.1-201ENST00000448030 501 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC073901.1-201ENST00000462471 408 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RN7SL601P-201ENST00000471221 293 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AP000870.1-201ENST00000472927 406 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RPL30P1-201ENST00000488676 339 ntBASIC3.02□□□□□ -1.93
CLK3P49761 RPL23AP49-201ENST00000492925 468 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AP004607.1-201ENST00000524456 203 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.02□□□□□ -1.93
CLK3P49761 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK3P49761 AL451007.1-201ENST00000595491 289 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC024220.1-201ENST00000603675 484 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC011921.3-201ENST00000605540 361 ntBASIC3.02□□□□□ -1.93
CLK3P49761 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK3P49761 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.02□□□□□ -1.93
CLK3P49761 AL590240.4-201ENST00000616908 390 ntBASIC3.02□□□□□ -1.93
CLK3P49761 MIR7975-201ENST00000619350 68 ntBASIC3.02□□□□□ -1.93
CLK3P49761 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
CLK3P49761 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 AL359854.1-201ENST00000614203 1594 ntBASIC3.02□□□□□ -1.93
CLK3P49761 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 ADAM3A-203ENST00000461344 2157 ntBASIC3.02□□□□□ -1.93
CLK3P49761 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK3P49761 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLK3P49761 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLK3P49761 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
CLK3P49761 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLK3P49761 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLK3P49761 SNORA25.1-201ENST00000362326 128 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.82-201ENST00000363000 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.92-201ENST00000363043 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.235-201ENST00000364412 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.275-201ENST00000364726 110 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.306-201ENST00000365015 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.312-201ENST00000365089 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.322-201ENST00000365151 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 CD24P4-201ENST00000382840 243 ntBASIC3.01□□□□□ -1.93
CLK3P49761 RNU6-21P-201ENST00000384710 107 ntBASIC3.01□□□□□ -1.93
CLK3P49761 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
CLK3P49761 MIR34B-201ENST00000385076 84 ntBASIC3.01□□□□□ -1.93
CLK3P49761 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.590-201ENST00000410140 107 ntBASIC3.01□□□□□ -1.93
CLK3P49761 SNORD12B-201ENST00000410433 91 ntBASIC3.01□□□□□ -1.93
CLK3P49761 AL390729.2-201ENST00000416137 156 ntBASIC3.01□□□□□ -1.93
CLK3P49761 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK3P49761 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK3P49761 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK3P49761 AC096638.1-201ENST00000444678 216 ntBASIC3.01□□□□□ -1.93
CLK3P49761 HMGN2P10-201ENST00000448085 265 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.650-201ENST00000459002 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
CLK3P49761 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.777-201ENST00000516982 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK3P49761 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK3P49761 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK3P49761 AC021739.1-201ENST00000559631 174 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.771-201ENST00000598668 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 Y_RNA.789-201ENST00000622480 102 ntBASIC3.01□□□□□ -1.93
CLK3P49761 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CLK3P49761 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3□□□□□ -1.93
CLK3P49761 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 UBE2WP1-201ENST00000362030 340 ntBASIC3□□□□□ -1.93
CLK3P49761 RNU1-105P-201ENST00000363470 161 ntBASIC3□□□□□ -1.93
CLK3P49761 RNU6-704P-201ENST00000364162 103 ntBASIC3□□□□□ -1.93
CLK3P49761 Y_RNA.240-201ENST00000364469 95 ntBASIC3□□□□□ -1.93
CLK3P49761 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 RNU6-514P-201ENST00000384208 107 ntBASIC3□□□□□ -1.93
CLK3P49761 UBA52P6-201ENST00000399822 382 ntBASIC3□□□□□ -1.93
CLK3P49761 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 MIR887-201ENST00000401258 79 ntBASIC3□□□□□ -1.93
CLK3P49761 RNU4-30P-201ENST00000410245 143 ntBASIC3□□□□□ -1.93
CLK3P49761 RNA5SP229-201ENST00000410809 99 ntBASIC3□□□□□ -1.93
CLK3P49761 AL365496.1-201ENST00000426885 215 ntBASIC3□□□□□ -1.93
CLK3P49761 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK3P49761 AL031659.1-201ENST00000447075 539 ntBASIC3□□□□□ -1.93
CLK3P49761 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
CLK3P49761 AC087477.1-201ENST00000465747 340 ntBASIC3□□□□□ -1.93
CLK3P49761 RPL26P26-201ENST00000480251 434 ntBASIC3□□□□□ -1.93
CLK3P49761 AF186996.7-201ENST00000492781 209 ntBASIC3□□□□□ -1.93
CLK3P49761 RNU7-200P-201ENST00000516105 62 ntBASIC3□□□□□ -1.93
CLK3P49761 Y_RNA.679-201ENST00000516416 91 ntBASIC3□□□□□ -1.93
CLK3P49761 RN7SKP49-201ENST00000516675 260 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms