Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-827P-201ENST00000365553 106 ntBASIC2.34□□□□□ -2.03
CLK1P49759 RNU1-57P-201ENST00000384491 166 ntBASIC2.34□□□□□ -2.03
CLK1P49759 RNU6-1160P-201ENST00000384546 104 ntBASIC2.34□□□□□ -2.03
CLK1P49759 NUP35P1-201ENST00000422734 947 ntBASIC2.34□□□□□ -2.03
CLK1P49759 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLK1P49759 RPL23AP6-201ENST00000446637 472 ntBASIC2.34□□□□□ -2.03
CLK1P49759 MTND4P19-201ENST00000446659 478 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AL031274.1-201ENST00000450334 232 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.34□□□□□ -2.03
CLK1P49759 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.34□□□□□ -2.03
CLK1P49759 PCMTD1P1-201ENST00000455560 355 ntBASIC2.34□□□□□ -2.03
CLK1P49759 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLK1P49759 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
CLK1P49759 snoU109.2-201ENST00000459316 135 ntBASIC2.34□□□□□ -2.03
CLK1P49759 HMGB1P35-201ENST00000503360 598 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.34□□□□□ -2.03
CLK1P49759 RNU6-470P-201ENST00000515954 104 ntBASIC2.34□□□□□ -2.03
CLK1P49759 RNU6-586P-201ENST00000517265 104 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.34□□□□□ -2.03
CLK1P49759 AC109446.1-201ENST00000566172 220 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.34□□□□□ -2.03
CLK1P49759 AC008749.1-201ENST00000597650 306 ntBASIC2.34□□□□□ -2.03
CLK1P49759 RPL30P11-203ENST00000598995 310 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AC009314.1-201ENST00000603871 304 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AC016925.2-201ENST00000605108 242 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AL033523.1-201ENST00000605153 153 ntBASIC2.34□□□□□ -2.03
CLK1P49759 AL355802.3-201ENST00000607571 545 ntBASIC2.34□□□□□ -2.03
CLK1P49759 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.34□□□□□ -2.03
CLK1P49759 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLK1P49759 RNU6-78P-201ENST00000362897 107 ntBASIC2.33□□□□□ -2.04
CLK1P49759 Y_RNA.252-201ENST00000364556 101 ntBASIC2.33□□□□□ -2.04
CLK1P49759 MIR34A-201ENST00000385130 110 ntBASIC2.33□□□□□ -2.04
CLK1P49759 MIR676-201ENST00000390702 67 ntBASIC2.33□□□□□ -2.04
CLK1P49759 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
CLK1P49759 AC025750.2-201ENST00000442609 450 ntBASIC2.33□□□□□ -2.04
CLK1P49759 AL035666.1-201ENST00000446195 348 ntBASIC2.33□□□□□ -2.04
CLK1P49759 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.33□□□□□ -2.04
CLK1P49759 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.33□□□□□ -2.04
CLK1P49759 RNU6-1037P-201ENST00000459571 107 ntBASIC2.33□□□□□ -2.04
CLK1P49759 MED28P2-201ENST00000475771 317 ntBASIC2.33□□□□□ -2.04
CLK1P49759 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.33□□□□□ -2.04
CLK1P49759 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.33□□□□□ -2.04
CLK1P49759 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.33□□□□□ -2.04
CLK1P49759 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.33□□□□□ -2.04
CLK1P49759 RNA5SP356-201ENST00000515972 94 ntBASIC2.33□□□□□ -2.04
CLK1P49759 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.33□□□□□ -2.04
CLK1P49759 RNU6-1045P-201ENST00000516321 107 ntBASIC2.33□□□□□ -2.04
CLK1P49759 RN7SKP295-201ENST00000517264 153 ntBASIC2.33□□□□□ -2.04
CLK1P49759 AC109329.1-201ENST00000518744 317 ntBASIC2.33□□□□□ -2.04
CLK1P49759 AC103996.1-201ENST00000555468 102 ntBASIC2.33□□□□□ -2.04
CLK1P49759 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CLK1P49759 AL162730.1-201ENST00000605734 292 ntBASIC2.33□□□□□ -2.04
CLK1P49759 MIR3976-201ENST00000606807 139 ntBASIC2.33□□□□□ -2.04
CLK1P49759 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.33□□□□□ -2.04
CLK1P49759 U4.7-201ENST00000638126 106 ntBASIC2.33□□□□□ -2.04
CLK1P49759 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLK1P49759 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
CLK1P49759 HAUS6P2-201ENST00000433254 2404 ntBASIC2.32□□□□□ -2.04
CLK1P49759 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.32□□□□□ -2.04
CLK1P49759 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
CLK1P49759 Y_RNA.2-201ENST00000362330 96 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RNU6-428P-201ENST00000362942 107 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RNU6-942P-201ENST00000363002 107 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RNU6-1317P-201ENST00000364582 104 ntBASIC2.32□□□□□ -2.04
CLK1P49759 SNORA41-201ENST00000384675 132 ntBASIC2.32□□□□□ -2.04
CLK1P49759 MIR27B-201ENST00000385129 97 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RPS29P13-201ENST00000402041 169 ntBASIC2.32□□□□□ -2.04
CLK1P49759 FTH1P15-201ENST00000406984 280 ntBASIC2.32□□□□□ -2.04
CLK1P49759 MCFD2P1-201ENST00000417812 300 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AL158823.1-201ENST00000418441 478 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.32□□□□□ -2.04
CLK1P49759 HMGN2P19-201ENST00000425149 265 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.32□□□□□ -2.04
CLK1P49759 AL137159.1-201ENST00000452808 512 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RPS29P27-201ENST00000463711 170 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.32□□□□□ -2.04
CLK1P49759 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
CLK1P49759 RNU6-1137P-201ENST00000517073 99 ntBASIC2.32□□□□□ -2.04
CLK1P49759 RNU6-699P-201ENST00000517081 110 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AC109479.2-201ENST00000517842 174 ntBASIC2.32□□□□□ -2.04
CLK1P49759 CKS1BP7-201ENST00000522230 235 ntBASIC2.32□□□□□ -2.04
CLK1P49759 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AC006504.6-201ENST00000590142 199 ntBASIC2.32□□□□□ -2.04
CLK1P49759 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.32□□□□□ -2.04
CLK1P49759 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLK1P49759 CENPCP1-201ENST00000533085 2578 ntBASIC2.32□□□□□ -2.04
CLK1P49759 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLK1P49759 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLK1P49759 RNU6-1010P-201ENST00000362757 107 ntBASIC2.31□□□□□ -2.04
CLK1P49759 SNORA5B-201ENST00000363786 132 ntBASIC2.31□□□□□ -2.04
CLK1P49759 RNU6-336P-201ENST00000364891 107 ntBASIC2.31□□□□□ -2.04
CLK1P49759 Y_RNA.422-201ENST00000384054 114 ntBASIC2.31□□□□□ -2.04
CLK1P49759 RNY1P14-201ENST00000384426 108 ntBASIC2.31□□□□□ -2.04
CLK1P49759 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLK1P49759 U3.37-201ENST00000408528 213 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.31□□□□□ -2.04
CLK1P49759 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.31□□□□□ -2.04
CLK1P49759 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC245102.2-201ENST00000448956 180 ntBASIC2.31□□□□□ -2.04
CLK1P49759 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms