Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNA5SP468-201ENST00000516782 93 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-928P-201ENST00000516876 104 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AC023442.1-201ENST00000531247 422 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AC110741.2-201ENST00000605278 268 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RPL23AP88-201ENST00000605759 454 ntBASIC1.96□□□□□ -2.1
ATRXP46100 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATRXP46100 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ATRXP46100 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.96□□□□□ -2.1
ATRXP46100 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-1309P-201ENST00000363305 108 ntBASIC1.96□□□□□ -2.1
ATRXP46100 Y_RNA.153-201ENST00000363615 91 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-450P-201ENST00000364654 107 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-550P-201ENST00000391057 101 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AL030996.1-201ENST00000411430 235 ntBASIC1.96□□□□□ -2.1
ATRXP46100 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.96□□□□□ -2.1
ATRXP46100 RPS6P12-201ENST00000432491 726 ntBASIC1.96□□□□□ -2.1
ATRXP46100 SNAP23P1-201ENST00000433229 246 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AL645568.3-201ENST00000433683 316 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.96□□□□□ -2.1
ATRXP46100 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.96□□□□□ -2.1
ATRXP46100 HMGN2P16-201ENST00000456802 261 ntBASIC1.96□□□□□ -2.1
ATRXP46100 snoU13.4-201ENST00000458916 104 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-953P-201ENST00000459154 107 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-635P-201ENST00000516651 102 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.96□□□□□ -2.1
ATRXP46100 MIR3683-201ENST00000580847 82 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AL161423.1-201ENST00000613700 262 ntBASIC1.96□□□□□ -2.1
ATRXP46100 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.96□□□□□ -2.1
ATRXP46100 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATRXP46100 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ATRXP46100 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 RNY1P16-201ENST00000363063 111 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RNA5SP456-201ENST00000364002 114 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-738P-201ENST00000384531 106 ntBASIC1.95□□□□□ -2.1
ATRXP46100 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ATRXP46100 Y_RNA.623-201ENST00000411128 95 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.95□□□□□ -2.1
ATRXP46100 AC092809.3-201ENST00000415453 231 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RPL21P38-201ENST00000418090 167 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 AC015911.1-201ENST00000495111 156 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.95□□□□□ -2.1
ATRXP46100 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-911P-201ENST00000516523 104 ntBASIC1.95□□□□□ -2.1
ATRXP46100 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
ATRXP46100 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 AL512598.1-201ENST00000610158 273 ntBASIC1.95□□□□□ -2.1
ATRXP46100 MIR376A1-201ENST00000616574 68 ntBASIC1.95□□□□□ -2.1
ATRXP46100 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATRXP46100 ZNF299P-201ENST00000406845 1804 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AC008264.2-201ENST00000610193 3731 ntBASIC1.95□□□□□ -2.1
ATRXP46100 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-1329P-201ENST00000365664 107 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-1013P-201ENST00000384180 107 ntBASIC1.95□□□□□ -2.1
ATRXP46100 NDUFB4P7-201ENST00000423198 363 ntBASIC1.95□□□□□ -2.1
ATRXP46100 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RPS27P29-201ENST00000463110 252 ntBASIC1.95□□□□□ -2.1
ATRXP46100 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.95□□□□□ -2.1
ATRXP46100 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-388P-201ENST00000517012 105 ntBASIC1.95□□□□□ -2.1
ATRXP46100 SNORA31.18-201ENST00000517043 134 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-389P-201ENST00000517048 105 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.95□□□□□ -2.1
ATRXP46100 AMZ2P1-203ENST00000565833 850 ntBASIC1.95□□□□□ -2.1
ATRXP46100 RPL23AP78-201ENST00000599928 470 ntBASIC1.95□□□□□ -2.1
ATRXP46100 VN1R107P-201ENST00000601784 209 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AC136443.5-201ENST00000603741 370 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
ATRXP46100 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 7SK.10-201ENST00000621414 298 ntBASIC1.95□□□□□ -2.1
ATRXP46100 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
ATRXP46100 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ATRXP46100 RNU6-227P-201ENST00000362865 103 ntBASIC1.94□□□□□ -2.1
ATRXP46100 Y_RNA.314-201ENST00000365114 102 ntBASIC1.94□□□□□ -2.1
ATRXP46100 SNORD116-11-201ENST00000383882 92 ntBASIC1.94□□□□□ -2.1
ATRXP46100 Y_RNA.459-201ENST00000384251 102 ntBASIC1.94□□□□□ -2.1
ATRXP46100 Y_RNA.577-201ENST00000384794 101 ntBASIC1.94□□□□□ -2.1
ATRXP46100 RNA5SP252-201ENST00000391131 119 ntBASIC1.94□□□□□ -2.1
ATRXP46100 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.94□□□□□ -2.1
ATRXP46100 HMGN2P21-201ENST00000447764 270 ntBASIC1.94□□□□□ -2.1
ATRXP46100 AL353752.1-201ENST00000454946 260 ntBASIC1.94□□□□□ -2.1
ATRXP46100 RNU6-897P-201ENST00000517135 105 ntBASIC1.94□□□□□ -2.1
ATRXP46100 AC109446.1-201ENST00000566172 220 ntBASIC1.94□□□□□ -2.1
ATRXP46100 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
ATRXP46100 PNPT1P2-201ENST00000456768 2050 ntBASIC1.94□□□□□ -2.1
ATRXP46100 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ATRXP46100 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ATRXP46100 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ATRXP46100 MIR10B-201ENST00000385011 110 ntBASIC1.94□□□□□ -2.1
ATRXP46100 MIR628-201ENST00000385229 95 ntBASIC1.94□□□□□ -2.1
ATRXP46100 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ATRXP46100 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.94□□□□□ -2.1
ATRXP46100 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.94□□□□□ -2.1
ATRXP46100 AL078601.1-201ENST00000444542 271 ntBASIC1.94□□□□□ -2.1
ATRXP46100 AC013470.1-201ENST00000453438 462 ntBASIC1.94□□□□□ -2.1
ATRXP46100 AC008571.1-201ENST00000467232 300 ntBASIC1.94□□□□□ -2.1
ATRXP46100 GZMAP1-201ENST00000503054 631 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms