Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC109446.1-201ENST00000566172 220 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC005786.1-201ENST00000588553 154 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC103591.3-201ENST00000608684 209 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 Z99129.1-201ENST00000612510 255 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 SEPT14P19-203ENST00000633205 211 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TNFSF9P41273 Y_RNA.332-201ENST00000365271 113 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 RNU4-20P-201ENST00000365601 151 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 RNU6-43P-201ENST00000384302 107 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 SNORD73A-201ENST00000386062 65 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AL590135.1-201ENST00000422215 156 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC019205.3-201ENST00000424573 156 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC244670.1-201ENST00000436879 112 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 SNRPEP8-201ENST00000442866 260 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC016700.2-201ENST00000446011 156 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC073415.1-201ENST00000449240 153 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TNFSF9P41273 RNU7-180P-201ENST00000459240 63 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC015911.1-201ENST00000495111 156 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.34□□□□□ -2.19
TNFSF9P41273 AC093534.1-201ENST00000504977 132 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.34□□□□□ -2.19
TNFSF9P41273 AC108078.1-201ENST00000508073 725 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC091133.4-201ENST00000511142 308 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.34□□□□□ -2.19
TNFSF9P41273 AC022880.1-201ENST00000534017 973 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 HIF1AP1-201ENST00000553642 175 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.34□□□□□ -2.19
TNFSF9P41273 MIR3136-201ENST00000583498 78 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC008945.2-201ENST00000606056 604 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 AC008536.2-201ENST00000607284 349 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TNFSF9P41273 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.34□□□□□ -2.19
TNFSF9P41273 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.34□□□□□ -2.19
TNFSF9P41273 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TNFSF9P41273 MTND5P35-201ENST00000557537 1720 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RNU4-56P-201ENST00000364700 142 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RNU6-336P-201ENST00000364891 107 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RNU6-438P-201ENST00000365561 103 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RNU6-393P-201ENST00000384475 107 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RNY3P9-201ENST00000384727 106 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 CALM2P3-201ENST00000400429 449 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 MTCO3P41-201ENST00000414801 328 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 RPL21P111-201ENST00000418453 477 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.33□□□□□ -2.2
TNFSF9P41273 AC010975.2-201ENST00000427781 588 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.33□□□□□ -2.2
TNFSF9P41273 PRPS1P1-201ENST00000445305 876 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC112492.4-201ENST00000456549 352 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.33□□□□□ -2.2
TNFSF9P41273 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC025465.3-201ENST00000510570 311 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TNFSF9P41273 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.33□□□□□ -2.2
TNFSF9P41273 AC103996.1-201ENST00000555468 102 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC245008.1-201ENST00000608123 476 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AC007684.1-201ENST00000609671 477 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 AL354950.2-201ENST00000617939 290 ntBASIC1.33□□□□□ -2.2
TNFSF9P41273 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
TNFSF9P41273 RNU6-266P-201ENST00000364225 107 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 RNU6-1103P-201ENST00000384150 107 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 MIR518E-201ENST00000385252 88 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.32□□□□□ -2.2
TNFSF9P41273 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.32□□□□□ -2.2
TNFSF9P41273 NDUFA5P4-201ENST00000436704 385 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.32□□□□□ -2.2
TNFSF9P41273 MTND1P29-201ENST00000448112 647 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.32□□□□□ -2.2
TNFSF9P41273 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 HMGN1P13-201ENST00000505795 138 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC097473.1-201ENST00000508142 408 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 SNORA31.16-201ENST00000516773 139 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC109479.2-201ENST00000517842 174 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC023050.3-201ENST00000541142 333 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 HSPE1P4-201ENST00000550617 308 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.32□□□□□ -2.2
TNFSF9P41273 MIR4424-201ENST00000585257 86 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC073648.5-201ENST00000603502 305 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC073413.2-201ENST00000604332 360 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AC072046.2-201ENST00000618366 268 ntBASIC1.32□□□□□ -2.2
TNFSF9P41273 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
TNFSF9P41273 MTND5P26-201ENST00000426018 1752 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 Y_RNA.1-201ENST00000352915 104 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 Y_RNA.167-201ENST00000363735 109 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 Y_RNA.191-201ENST00000363972 113 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RNU6-1141P-201ENST00000364520 107 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RNU6-827P-201ENST00000365553 106 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms