Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.18□□□□□ -2.22
RFC3P40938 RNA5SP269-201ENST00000459032 137 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
RFC3P40938 RNA5SP481-201ENST00000516814 122 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AP002963.1-201ENST00000530590 184 ntBASIC1.18□□□□□ -2.22
RFC3P40938 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
RFC3P40938 AC084364.2-201ENST00000546924 395 ntBASIC1.18□□□□□ -2.22
RFC3P40938 MTND1P24-201ENST00000552175 861 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.18□□□□□ -2.22
RFC3P40938 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.18□□□□□ -2.22
RFC3P40938 AC093424.1-201ENST00000604999 338 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AC007494.3-201ENST00000624660 743 ntBASIC1.18□□□□□ -2.22
RFC3P40938 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
RFC3P40938 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RFC3P40938 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.17□□□□□ -2.22
RFC3P40938 RNU6-862P-201ENST00000362804 105 ntBASIC1.17□□□□□ -2.22
RFC3P40938 RNU6-181P-201ENST00000363225 107 ntBASIC1.17□□□□□ -2.22
RFC3P40938 SNORA63D-201ENST00000364359 132 ntBASIC1.17□□□□□ -2.22
RFC3P40938 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
RFC3P40938 BX295541.1-201ENST00000417774 250 ntBASIC1.17□□□□□ -2.22
RFC3P40938 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
RFC3P40938 AL133217.1-201ENST00000450980 425 ntBASIC1.17□□□□□ -2.22
RFC3P40938 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.17□□□□□ -2.22
RFC3P40938 RPS23P5-201ENST00000495419 428 ntBASIC1.17□□□□□ -2.22
RFC3P40938 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.17□□□□□ -2.22
RFC3P40938 AC108078.1-201ENST00000508073 725 ntBASIC1.17□□□□□ -2.22
RFC3P40938 Y_RNA.673-201ENST00000516306 88 ntBASIC1.17□□□□□ -2.22
RFC3P40938 RN7SKP287-201ENST00000516546 266 ntBASIC1.17□□□□□ -2.22
RFC3P40938 RNU6-445P-201ENST00000516949 107 ntBASIC1.17□□□□□ -2.22
RFC3P40938 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
RFC3P40938 AC005668.1-201ENST00000571142 476 ntBASIC1.17□□□□□ -2.22
RFC3P40938 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
RFC3P40938 SNORA43.4-201ENST00000629559 138 ntBASIC1.17□□□□□ -2.22
RFC3P40938 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.17□□□□□ -2.22
RFC3P40938 AC100821.1-201ENST00000523153 2479 ntBASIC1.16□□□□□ -2.22
RFC3P40938 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
RFC3P40938 RNU6-1026P-201ENST00000384465 108 ntBASIC1.16□□□□□ -2.22
RFC3P40938 MIR499A-201ENST00000384903 122 ntBASIC1.16□□□□□ -2.22
RFC3P40938 MT-TH-201ENST00000387441 69 ntBASIC1.16□□□□□ -2.22
RFC3P40938 MIR208B-201ENST00000401172 77 ntBASIC1.16□□□□□ -2.22
RFC3P40938 RNU2-7P-201ENST00000410794 178 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.16□□□□□ -2.22
RFC3P40938 ARL5AP1-201ENST00000418991 388 ntBASIC1.16□□□□□ -2.22
RFC3P40938 RPS27P16-201ENST00000425758 201 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.16□□□□□ -2.22
RFC3P40938 AL121601.2-201ENST00000438019 707 ntBASIC1.16□□□□□ -2.22
RFC3P40938 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.16□□□□□ -2.22
RFC3P40938 RNU7-167P-201ENST00000459160 62 ntBASIC1.16□□□□□ -2.22
RFC3P40938 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.16□□□□□ -2.22
RFC3P40938 AC105417.1-201ENST00000514691 285 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AL137161.1-201ENST00000532231 390 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AC090517.1-201ENST00000569307 266 ntBASIC1.16□□□□□ -2.22
RFC3P40938 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
RFC3P40938 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
RFC3P40938 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.16□□□□□ -2.22
RFC3P40938 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
RFC3P40938 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.15□□□□□ -2.22
RFC3P40938 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RFC3P40938 SNORA36A-201ENST00000384221 132 ntBASIC1.15□□□□□ -2.23
RFC3P40938 RNY3P10-201ENST00000384764 102 ntBASIC1.15□□□□□ -2.23
RFC3P40938 MIR548B-201ENST00000385247 97 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AL161935.2-201ENST00000414627 60 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.15□□□□□ -2.23
RFC3P40938 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.15□□□□□ -2.23
RFC3P40938 MTND2P18-201ENST00000419962 1030 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.15□□□□□ -2.23
RFC3P40938 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.15□□□□□ -2.23
RFC3P40938 AC012306.1-201ENST00000423267 114 ntBASIC1.15□□□□□ -2.23
RFC3P40938 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.15□□□□□ -2.23
RFC3P40938 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.15□□□□□ -2.23
RFC3P40938 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.15□□□□□ -2.23
RFC3P40938 SNRPGP9-201ENST00000456025 225 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AL356010.1-201ENST00000456364 102 ntBASIC1.15□□□□□ -2.23
RFC3P40938 snoU13.30-201ENST00000458951 104 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
RFC3P40938 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.15□□□□□ -2.23
RFC3P40938 RNU6-856P-201ENST00000516959 98 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.15□□□□□ -2.23
RFC3P40938 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.15□□□□□ -2.23
RFC3P40938 AC012414.6-201ENST00000568241 401 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AP005136.1-201ENST00000579765 429 ntBASIC1.15□□□□□ -2.23
RFC3P40938 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
RFC3P40938 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RFC3P40938 Y_RNA.132-201ENST00000363421 102 ntBASIC1.14□□□□□ -2.23
RFC3P40938 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
RFC3P40938 RNU1-96P-201ENST00000364163 162 ntBASIC1.14□□□□□ -2.23
RFC3P40938 AL117342.1-201ENST00000404861 406 ntBASIC1.14□□□□□ -2.23
RFC3P40938 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.14□□□□□ -2.23
RFC3P40938 MTCO2P3-201ENST00000442543 421 ntBASIC1.14□□□□□ -2.23
RFC3P40938 OR2AQ1P-201ENST00000451972 200 ntBASIC1.14□□□□□ -2.23
RFC3P40938 SNRPFP3-201ENST00000457792 225 ntBASIC1.14□□□□□ -2.23
RFC3P40938 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.14□□□□□ -2.23
RFC3P40938 AC079140.2-201ENST00000506193 142 ntBASIC1.14□□□□□ -2.23
RFC3P40938 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.14□□□□□ -2.23
RFC3P40938 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
RFC3P40938 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
RFC3P40938 AC060788.1-201ENST00000521318 469 ntBASIC1.14□□□□□ -2.23
RFC3P40938 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms