Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP003461.1-201ENST00000528866 78 ntBASIC0.88□□□□□ -2.27
RPA3P35244 CBX3P8-201ENST00000532412 525 ntBASIC0.88□□□□□ -2.27
RPA3P35244 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.88□□□□□ -2.27
RPA3P35244 MIR4709-201ENST00000577272 72 ntBASIC0.88□□□□□ -2.27
RPA3P35244 MIR3664-201ENST00000579074 99 ntBASIC0.88□□□□□ -2.27
RPA3P35244 HSPE1P19-201ENST00000603327 295 ntBASIC0.88□□□□□ -2.27
RPA3P35244 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.88□□□□□ -2.27
RPA3P35244 AC068647.2-201ENST00000637380 353 ntBASIC0.88□□□□□ -2.27
RPA3P35244 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
RPA3P35244 RNA5SP259-201ENST00000365541 109 ntBASIC0.87□□□□□ -2.27
RPA3P35244 SNORA18.2-201ENST00000383865 132 ntBASIC0.87□□□□□ -2.27
RPA3P35244 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
RPA3P35244 AC002486.1-201ENST00000435098 391 ntBASIC0.87□□□□□ -2.27
RPA3P35244 C1DP4-201ENST00000455429 424 ntBASIC0.87□□□□□ -2.27
RPA3P35244 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.87□□□□□ -2.27
RPA3P35244 AC008015.1-201ENST00000555505 465 ntBASIC0.87□□□□□ -2.27
RPA3P35244 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.87□□□□□ -2.27
RPA3P35244 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.87□□□□□ -2.27
RPA3P35244 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.87□□□□□ -2.27
RPA3P35244 TMF1P1-201ENST00000576058 373 ntBASIC0.87□□□□□ -2.27
RPA3P35244 MIR4775-201ENST00000581168 75 ntBASIC0.87□□□□□ -2.27
RPA3P35244 AC002044.1-201ENST00000606707 158 ntBASIC0.87□□□□□ -2.27
RPA3P35244 BX284668.6-201ENST00000606899 438 ntBASIC0.87□□□□□ -2.27
RPA3P35244 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.87□□□□□ -2.27
RPA3P35244 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
RPA3P35244 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.87□□□□□ -2.27
RPA3P35244 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RPA3P35244 RNY4P34-201ENST00000364779 95 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RNU6-968P-201ENST00000384076 107 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RNU6-74P-201ENST00000384235 107 ntBASIC0.86□□□□□ -2.27
RPA3P35244 Y_RNA.598-201ENST00000410480 95 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RNU6-195P-201ENST00000411352 109 ntBASIC0.86□□□□□ -2.27
RPA3P35244 HSFY7P-201ENST00000432672 318 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AL596276.1-201ENST00000434465 418 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.86□□□□□ -2.27
RPA3P35244 HSFY8P-201ENST00000437934 318 ntBASIC0.86□□□□□ -2.27
RPA3P35244 PRPS1P1-201ENST00000445305 876 ntBASIC0.86□□□□□ -2.27
RPA3P35244 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.86□□□□□ -2.27
RPA3P35244 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.86□□□□□ -2.27
RPA3P35244 RNU7-34P-201ENST00000459394 64 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC008628.2-201ENST00000502605 298 ntBASIC0.86□□□□□ -2.27
RPA3P35244 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.86□□□□□ -2.27
RPA3P35244 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RN7SKP265-201ENST00000516448 223 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RNU6-567P-201ENST00000516746 107 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.86□□□□□ -2.27
RPA3P35244 NIFKP6-201ENST00000598115 845 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AP001836.1-201ENST00000604675 523 ntBASIC0.86□□□□□ -2.27
RPA3P35244 RPL17P51-201ENST00000605218 238 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
RPA3P35244 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC005520.5-201ENST00000613926 164 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC022306.3-201ENST00000619930 550 ntBASIC0.86□□□□□ -2.27
RPA3P35244 AC022418.1-201ENST00000624118 445 ntBASIC0.86□□□□□ -2.27
RPA3P35244 SNORA43.4-201ENST00000629559 138 ntBASIC0.86□□□□□ -2.27
RPA3P35244 MIR338-201ENST00000636369 67 ntBASIC0.86□□□□□ -2.27
RPA3P35244 SNORA33-201ENST00000363664 130 ntBASIC0.85□□□□□ -2.27
RPA3P35244 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
RPA3P35244 RNU6-1029P-201ENST00000384109 107 ntBASIC0.85□□□□□ -2.27
RPA3P35244 RNU6-393P-201ENST00000384475 107 ntBASIC0.85□□□□□ -2.27
RPA3P35244 MIR454-201ENST00000390180 115 ntBASIC0.85□□□□□ -2.27
RPA3P35244 RPS29P15-201ENST00000458329 171 ntBASIC0.85□□□□□ -2.27
RPA3P35244 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.85□□□□□ -2.27
RPA3P35244 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.85□□□□□ -2.27
RPA3P35244 AC103851.1-201ENST00000506833 274 ntBASIC0.85□□□□□ -2.27
RPA3P35244 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.85□□□□□ -2.27
RPA3P35244 MTATP6P9-201ENST00000515039 680 ntBASIC0.85□□□□□ -2.27
RPA3P35244 SNORA25.17-201ENST00000517184 124 ntBASIC0.85□□□□□ -2.27
RPA3P35244 DEFB131C-201ENST00000528817 165 ntBASIC0.85□□□□□ -2.27
RPA3P35244 MIR548AB-201ENST00000584917 84 ntBASIC0.85□□□□□ -2.27
RPA3P35244 AC064872.1-201ENST00000604823 1072 ntBASIC0.85□□□□□ -2.27
RPA3P35244 AL353149.1-201ENST00000610667 244 ntBASIC0.85□□□□□ -2.27
RPA3P35244 MIR8070-201ENST00000616510 88 ntBASIC0.85□□□□□ -2.27
RPA3P35244 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
RPA3P35244 BX322639.1-202ENST00000423987 2213 ntBASIC0.84□□□□□ -2.27
RPA3P35244 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.27
RPA3P35244 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
RPA3P35244 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
RPA3P35244 RNU6-925P-201ENST00000384629 104 ntBASIC0.84□□□□□ -2.27
RPA3P35244 MIR1-2-201ENST00000384961 85 ntBASIC0.84□□□□□ -2.27
RPA3P35244 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RPA3P35244 SNORD70.1-201ENST00000391007 85 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AC012306.1-201ENST00000423267 114 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AL593851.1-201ENST00000426171 157 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.84□□□□□ -2.27
RPA3P35244 HSPE1P13-201ENST00000451143 297 ntBASIC0.84□□□□□ -2.27
RPA3P35244 RNU7-182P-201ENST00000459009 62 ntBASIC0.84□□□□□ -2.27
RPA3P35244 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AC079382.1-201ENST00000493346 557 ntBASIC0.84□□□□□ -2.27
RPA3P35244 LRRC34P2-201ENST00000514850 553 ntBASIC0.84□□□□□ -2.27
RPA3P35244 FABP5P5-201ENST00000515537 406 ntBASIC0.84□□□□□ -2.27
RPA3P35244 RNU2-69P-201ENST00000516061 100 ntBASIC0.84□□□□□ -2.27
RPA3P35244 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
RPA3P35244 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
RPA3P35244 MIR4742-201ENST00000581069 85 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AL022161.1-201ENST00000604390 213 ntBASIC0.84□□□□□ -2.27
RPA3P35244 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
RPA3P35244 AC064807.4-201ENST00000607201 407 ntBASIC0.84□□□□□ -2.27
RPA3P35244 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms