Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 FTH1P25-201ENST00000447665 469 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC021146.2-201ENST00000504736 556 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.53□□□□□ -2.16
SHMT2P34897 AC087441.2-201ENST00000529141 262 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC109446.1-201ENST00000566172 220 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 MIR3124-201ENST00000582636 67 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 BNIP3P25-201ENST00000596023 559 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC009994.1-201ENST00000606889 253 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AL022345.1-201ENST00000607292 135 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC005520.5-201ENST00000613926 164 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 FAM157A-202ENST00000615155 405 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.53□□□□□ -2.16
SHMT2P34897 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.53□□□□□ -2.16
SHMT2P34897 MIR340-201ENST00000362125 95 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-23P-201ENST00000363283 107 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 U3.9-201ENST00000363823 204 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 Y_RNA.231-201ENST00000364358 102 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU4-24P-201ENST00000364565 139 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-1329P-201ENST00000365664 107 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-1106P-201ENST00000390845 107 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU2-41P-201ENST00000410991 178 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.52□□□□□ -2.17
SHMT2P34897 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 UBE2V1P4-201ENST00000425374 344 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.52□□□□□ -2.17
SHMT2P34897 MTATP6P26-201ENST00000445926 662 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AL035666.1-201ENST00000446195 348 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-1037P-201ENST00000459571 107 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.52□□□□□ -2.17
SHMT2P34897 AC005741.1-201ENST00000511094 432 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-237P-201ENST00000515985 71 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 RNU6-567P-201ENST00000516746 107 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 SNORD60.2-201ENST00000516883 86 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
SHMT2P34897 EIF4A1P12-201ENST00000551910 141 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 SCOCP1-201ENST00000554676 349 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AL512360.1-201ENST00000555346 234 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.52□□□□□ -2.17
SHMT2P34897 CYP2C61P-201ENST00000604072 290 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AC103591.3-201ENST00000608684 209 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AC092954.2-201ENST00000609103 430 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AC068137.3-201ENST00000639191 341 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.52□□□□□ -2.17
SHMT2P34897 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
SHMT2P34897 AC121333.1-201ENST00000567488 2709 ntBASIC1.52□□□□□ -2.17
SHMT2P34897 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHMT2P34897 AC009541.1-201ENST00000438279 2662 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 RNU6-227P-201ENST00000362865 103 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 Y_RNA.194-201ENST00000363985 102 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 RNU4-75P-201ENST00000364621 146 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 SNORA48.1-201ENST00000390879 135 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 RNA5SP213-201ENST00000391031 106 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 RNU6-1068P-201ENST00000410958 103 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 VN1R36P-201ENST00000414936 291 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.51□□□□□ -2.17
SHMT2P34897 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.51□□□□□ -2.17
SHMT2P34897 AL359672.1-201ENST00000442302 409 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.51□□□□□ -2.17
SHMT2P34897 AC025465.4-201ENST00000513422 638 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.51□□□□□ -2.17
SHMT2P34897 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.51□□□□□ -2.17
SHMT2P34897 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.51□□□□□ -2.17
SHMT2P34897 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.51□□□□□ -2.17
SHMT2P34897 AC022513.1-201ENST00000624512 117 ntBASIC1.51□□□□□ -2.17
SHMT2P34897 RNU1-76P-201ENST00000362903 159 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 RNU6-1317P-201ENST00000364582 104 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 SNORA12.2-201ENST00000391040 156 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 EIF4E2P1-201ENST00000393781 255 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 MIR208B-201ENST00000401172 77 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AC009310.1-201ENST00000414414 451 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 ARL5AP1-201ENST00000418991 388 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.5□□□□□ -2.17
SHMT2P34897 AC012306.1-201ENST00000423267 114 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 MTCO1P20-201ENST00000425366 358 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AL513185.2-201ENST00000425543 193 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.5□□□□□ -2.17
SHMT2P34897 MTND3P9-201ENST00000429526 346 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.5□□□□□ -2.17
SHMT2P34897 SEPT14P3-201ENST00000439401 183 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AL732372.2-207ENST00000445840 183 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 SEPT14P2-201ENST00000453405 183 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AC008834.1-201ENST00000511612 175 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 SEPT14P4-201ENST00000513445 186 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 RNU6-1098P-201ENST00000516772 96 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.5□□□□□ -2.17
SHMT2P34897 FO082796.1-201ENST00000523795 183 ntBASIC1.5□□□□□ -2.17
SHMT2P34897 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms