Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SNORA25.18-201ENST00000607153 114 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.44□□□□□ -2.48
CLIP1P30622 AC138749.5-201ENST00000611461 208 ntBASIC-0.44□□□□□ -2.48
CLIP1P30622 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.44□□□□□ -2.48
CLIP1P30622 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
CLIP1P30622 RNU6-28P-201ENST00000362378 107 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 RNU6-438P-201ENST00000365561 103 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 MT-TQ-201ENST00000387372 72 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.45□□□□□ -2.48
CLIP1P30622 AC002486.1-201ENST00000435098 391 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 COX7BP2-201ENST00000437976 242 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 AC092170.1-201ENST00000440211 356 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 MTCO3P17-201ENST00000443775 513 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.45□□□□□ -2.48
CLIP1P30622 RBBP4P6-201ENST00000508098 202 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 AF235103.2-201ENST00000525753 346 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 AL159153.1-201ENST00000619688 317 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 AP000943.4-201ENST00000622912 357 ntBASIC-0.45□□□□□ -2.48
CLIP1P30622 SNORA25.3-201ENST00000363205 127 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 SNORA33-201ENST00000363664 130 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 RNU4-76P-201ENST00000364509 141 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 MIR610-201ENST00000385139 96 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 RNU6-679P-201ENST00000391003 106 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 RNA5SP109-201ENST00000391010 116 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 AL139396.1-201ENST00000421137 167 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 AC013262.1-201ENST00000426710 252 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 MTATP6P16-201ENST00000434543 526 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 MTCO1P19-201ENST00000443487 500 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.46□□□□□ -2.48
CLIP1P30622 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.46□□□□□ -2.48
CLIP1P30622 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.46□□□□□ -2.48
CLIP1P30622 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.46□□□□□ -2.48
CLIP1P30622 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.46□□□□□ -2.48
CLIP1P30622 MIR8076-201ENST00000611401 83 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 AC015726.2-201ENST00000620112 122 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 AC009268.2-201ENST00000621925 457 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.46□□□□□ -2.48
CLIP1P30622 RNU6-756P-201ENST00000383997 107 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 RNU6-166P-201ENST00000384371 107 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 MIR224-201ENST00000384889 81 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 MIR573-201ENST00000384964 99 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 RNU6-747P-201ENST00000390928 104 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 RNU6-241P-201ENST00000391148 104 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.47□□□□□ -2.48
CLIP1P30622 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.47□□□□□ -2.48
CLIP1P30622 ELOCP24-201ENST00000456370 334 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 SNORA31.10-201ENST00000516482 106 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 RNU1-117P-201ENST00000517041 158 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 AL391903.3-201ENST00000612158 163 ntBASIC-0.47□□□□□ -2.48
CLIP1P30622 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.47□□□□□ -2.48
CLIP1P30622 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 RNU4-9P-201ENST00000364951 139 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 RNU6-432P-201ENST00000384196 109 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 RNU6-114P-201ENST00000384704 105 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 SNORA40C-201ENST00000391285 128 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 SNORD83.1-201ENST00000411362 77 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.47□□□□□ -2.49
CLIP1P30622 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.47□□□□□ -2.49
CLIP1P30622 DPRXP1-201ENST00000426312 460 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 RPL7P55-201ENST00000450522 746 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 AL133217.1-201ENST00000450980 425 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 ART2BP-201ENST00000453501 499 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 snoU13.8-201ENST00000458890 104 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 AC010531.2-201ENST00000465012 153 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.47□□□□□ -2.49
CLIP1P30622 RNU6-714P-201ENST00000516963 103 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 AC090049.2-201ENST00000550377 109 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.47□□□□□ -2.49
CLIP1P30622 AL096861.1-201ENST00000610899 123 ntBASIC-0.47□□□□□ -2.49
CLIP1P30622 SNORD118-201ENST00000363593 134 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 SNORA32.2-201ENST00000384049 122 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 MIR643-201ENST00000385267 97 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AL451046.2-201ENST00000403074 277 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AC016909.1-201ENST00000415916 166 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AC027644.1-201ENST00000419595 298 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AC060773.1-201ENST00000421698 310 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AL606517.2-201ENST00000442855 241 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.48□□□□□ -2.49
CLIP1P30622 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CLIP1P30622 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.48□□□□□ -2.49
CLIP1P30622 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.48□□□□□ -2.49
CLIP1P30622 RNU6-917P-201ENST00000516294 104 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 SNRPGP1-201ENST00000553864 222 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 MIR4778-201ENST00000577635 80 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 MTND1P15-201ENST00000579262 949 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 MTND3P19-201ENST00000603825 345 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 AP002360.4-201ENST00000606980 481 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 MIR1295B-201ENST00000636144 60 ntBASIC-0.48□□□□□ -2.49
CLIP1P30622 FCF1P10-201ENST00000407590 479 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 MIR1827-201ENST00000408549 66 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 RPS26P42-201ENST00000413485 326 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 MED13P1-201ENST00000428342 171 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms