Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR5701-2-201ENST00000615634 82 ntBASIC2.11□□□□□ -2.07
SHC1P29353 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.11□□□□□ -2.07
SHC1P29353 MIR7515-201ENST00000637837 67 ntBASIC2.11□□□□□ -2.07
SHC1P29353 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHC1P29353 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
SHC1P29353 AC091812.1-201ENST00000432235 1948 ntBASIC2.11□□□□□ -2.07
SHC1P29353 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHC1P29353 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.1□□□□□ -2.07
SHC1P29353 Y_RNA.123-201ENST00000363338 102 ntBASIC2.1□□□□□ -2.07
SHC1P29353 Y_RNA.364-201ENST00000365532 101 ntBASIC2.1□□□□□ -2.07
SHC1P29353 Y_RNA.577-201ENST00000384794 101 ntBASIC2.1□□□□□ -2.07
SHC1P29353 RNU6-750P-201ENST00000390946 107 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC096644.2-201ENST00000429278 159 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AL591043.1-201ENST00000432461 424 ntBASIC2.1□□□□□ -2.07
SHC1P29353 RPS15AP28-201ENST00000435088 386 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC018634.1-201ENST00000437554 401 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC007969.2-201ENST00000441891 191 ntBASIC2.1□□□□□ -2.07
SHC1P29353 EEF1B2P7-201ENST00000451177 676 ntBASIC2.1□□□□□ -2.07
SHC1P29353 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.1□□□□□ -2.07
SHC1P29353 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC114801.2-201ENST00000503825 781 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.1□□□□□ -2.07
SHC1P29353 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
SHC1P29353 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
SHC1P29353 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
SHC1P29353 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.1□□□□□ -2.07
SHC1P29353 MRPS36P4-201ENST00000534436 298 ntBASIC2.1□□□□□ -2.07
SHC1P29353 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.1□□□□□ -2.07
SHC1P29353 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
SHC1P29353 AC136443.5-201ENST00000603741 370 ntBASIC2.1□□□□□ -2.07
SHC1P29353 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
SHC1P29353 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.1□□□□□ -2.07
SHC1P29353 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.1□□□□□ -2.07
SHC1P29353 AC138305.3-201ENST00000624988 240 ntBASIC2.1□□□□□ -2.07
SHC1P29353 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.1□□□□□ -2.07
SHC1P29353 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.1□□□□□ -2.07
SHC1P29353 ZNF299P-201ENST00000406845 1804 ntBASIC2.1□□□□□ -2.07
SHC1P29353 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SHC1P29353 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.09□□□□□ -2.07
SHC1P29353 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.07
SHC1P29353 MTND5P9-201ENST00000503854 1755 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNU6-858P-201ENST00000362436 107 ntBASIC2.09□□□□□ -2.07
SHC1P29353 SNORD32A-201ENST00000364805 84 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNA5SP126-201ENST00000365092 109 ntBASIC2.09□□□□□ -2.07
SHC1P29353 Y_RNA.314-201ENST00000365114 102 ntBASIC2.09□□□□□ -2.07
SHC1P29353 Y_RNA.459-201ENST00000384251 102 ntBASIC2.09□□□□□ -2.07
SHC1P29353 Y_RNA.527-201ENST00000384573 102 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNU6-985P-201ENST00000410182 104 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNU2-23P-201ENST00000410545 195 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNA5SP494-201ENST00000410653 129 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.09□□□□□ -2.07
SHC1P29353 AL353752.1-201ENST00000454946 260 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
SHC1P29353 RNU5F-8P-201ENST00000515941 111 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.09□□□□□ -2.07
SHC1P29353 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.09□□□□□ -2.07
SHC1P29353 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.09□□□□□ -2.07
SHC1P29353 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
SHC1P29353 MIR1244-1-201ENST00000612829 85 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AC087588.2-201ENST00000617667 426 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AL162373.1-201ENST00000620433 407 ntBASIC2.09□□□□□ -2.07
SHC1P29353 MIR1244-3-201ENST00000635744 85 ntBASIC2.09□□□□□ -2.07
SHC1P29353 MIR3199-2-201ENST00000636243 86 ntBASIC2.09□□□□□ -2.07
SHC1P29353 MIR1244-2-201ENST00000636449 85 ntBASIC2.09□□□□□ -2.07
SHC1P29353 MIR1244-4-202ENST00000636813 85 ntBASIC2.09□□□□□ -2.07
SHC1P29353 AC010329.5-201ENST00000623497 2174 ntBASIC2.09□□□□□ -2.08
SHC1P29353 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHC1P29353 AC009541.1-201ENST00000438279 2662 ntBASIC2.08□□□□□ -2.08
SHC1P29353 Z82209.1-201ENST00000422141 2135 ntBASIC2.08□□□□□ -2.08
SHC1P29353 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
SHC1P29353 RNU6-874P-201ENST00000362390 105 ntBASIC2.08□□□□□ -2.08
SHC1P29353 Y_RNA.133-201ENST00000363428 110 ntBASIC2.08□□□□□ -2.08
SHC1P29353 RNU1-115P-201ENST00000365329 160 ntBASIC2.08□□□□□ -2.08
SHC1P29353 RNU6-843P-201ENST00000384454 104 ntBASIC2.08□□□□□ -2.08
SHC1P29353 MIR144-201ENST00000384886 86 ntBASIC2.08□□□□□ -2.08
SHC1P29353 WARS2P1-201ENST00000429678 537 ntBASIC2.08□□□□□ -2.08
SHC1P29353 AC099799.1-201ENST00000439809 192 ntBASIC2.08□□□□□ -2.08
SHC1P29353 AL161651.1-201ENST00000440882 223 ntBASIC2.08□□□□□ -2.08
SHC1P29353 OSTCP8-201ENST00000445117 448 ntBASIC2.08□□□□□ -2.08
SHC1P29353 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.08□□□□□ -2.08
SHC1P29353 AC021146.2-201ENST00000504736 556 ntBASIC2.08□□□□□ -2.08
SHC1P29353 ACA59.2-201ENST00000517061 156 ntBASIC2.08□□□□□ -2.08
SHC1P29353 Y_RNA.720-201ENST00000517166 92 ntBASIC2.08□□□□□ -2.08
SHC1P29353 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHC1P29353 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.08□□□□□ -2.08
SHC1P29353 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
SHC1P29353 MIR4435-1-201ENST00000582552 80 ntBASIC2.08□□□□□ -2.08
SHC1P29353 AC091152.3-201ENST00000604227 325 ntBASIC2.08□□□□□ -2.08
SHC1P29353 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
SHC1P29353 AC005592.1-201ENST00000566527 1640 ntBASIC2.07□□□□□ -2.08
SHC1P29353 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.07□□□□□ -2.08
SHC1P29353 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
SHC1P29353 MIR544A-201ENST00000384855 91 ntBASIC2.07□□□□□ -2.08
SHC1P29353 BTF3L4P2-201ENST00000392798 346 ntBASIC2.07□□□□□ -2.08
SHC1P29353 RNU4-53P-201ENST00000410828 140 ntBASIC2.07□□□□□ -2.08
SHC1P29353 RNA5SP508-201ENST00000411327 119 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms