Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC021146.2-201ENST00000504736 556 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.72□□□□□ -2.13
PTPN6P29350 SEPT14P4-201ENST00000513445 186 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 RNU5F-4P-201ENST00000516581 114 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 FO082796.1-201ENST00000523795 183 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.72□□□□□ -2.13
PTPN6P29350 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.72□□□□□ -2.13
PTPN6P29350 AC011494.1-201ENST00000596454 237 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 AL590240.4-201ENST00000616908 390 ntBASIC1.72□□□□□ -2.13
PTPN6P29350 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTPN6P29350 Y_RNA.194-201ENST00000363985 102 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 RNA5SP493-201ENST00000364115 91 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 Y_RNA.231-201ENST00000364358 102 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 Y_RNA.332-201ENST00000365271 113 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.71□□□□□ -2.14
PTPN6P29350 RNU6-214P-201ENST00000384130 107 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 MTND1P1-201ENST00000445453 368 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AC114801.2-201ENST00000503825 781 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 SNORD60.2-201ENST00000516883 86 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AL157687.1-201ENST00000554853 619 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AC090517.1-201ENST00000569307 266 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AC004492.1-201ENST00000607036 742 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 AC064807.4-201ENST00000607201 407 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
PTPN6P29350 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTPN6P29350 LINC02555-201ENST00000563933 1951 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 OR4G1P-203ENST00000641984 1631 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 RNU6-1317P-201ENST00000364582 104 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 MIR514A2-201ENST00000385131 88 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 MIR514A3-201ENST00000385132 88 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 RNU6-1068P-201ENST00000410958 103 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN6P29350 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN6P29350 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.7□□□□□ -2.14
PTPN6P29350 SNRPEP8-201ENST00000442866 260 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.7□□□□□ -2.14
PTPN6P29350 ATP5EP1-201ENST00000510257 156 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 RNU6-1281P-201ENST00000516223 105 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN6P29350 AC005520.5-201ENST00000613926 164 ntBASIC1.7□□□□□ -2.14
PTPN6P29350 FER-210ENST00000628534 558 ntTSL 5 BASIC1.7□□□□□ -2.14
PTPN6P29350 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.7□□□□□ -2.14
PTPN6P29350 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PTPN6P29350 SNORD114-6-201ENST00000364393 72 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 SNORA32.2-201ENST00000384049 122 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RNU6-1026P-201ENST00000384465 108 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN6P29350 AL603825.1-201ENST00000438481 80 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC007547.1-201ENST00000462177 490 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RPS29P27-201ENST00000463711 170 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC019235.1-201ENST00000503847 207 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RNU6-1332P-201ENST00000516666 104 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RNU6-1098P-201ENST00000516772 96 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 Y_RNA.704-201ENST00000516851 102 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN6P29350 AK6P1-201ENST00000540219 478 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 SCOCP1-201ENST00000554676 349 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC245505.1-201ENST00000556398 224 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN6P29350 HMGB1P33-201ENST00000563485 527 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 MIR3169-201ENST00000578032 83 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.69□□□□□ -2.14
PTPN6P29350 AL162413.1-201ENST00000603198 110 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 RPL17P51-201ENST00000605218 238 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
PTPN6P29350 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PTPN6P29350 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.68□□□□□ -2.14
PTPN6P29350 RNU6-483P-201ENST00000384088 108 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 Y_RNA.517-201ENST00000384551 106 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 RNU6-780P-201ENST00000391030 104 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 ERLEC1P1-201ENST00000433806 578 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AMD1P1-201ENST00000457220 922 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 snoU13.6-201ENST00000458785 104 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC083904.1-201ENST00000487828 231 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 RPS23P5-201ENST00000495419 428 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN6P29350 AC092436.3-201ENST00000511788 257 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.68□□□□□ -2.14
PTPN6P29350 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC016256.1-201ENST00000547971 354 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.68□□□□□ -2.14
PTPN6P29350 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 RNU6-89P-201ENST00000606519 100 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC009994.1-201ENST00000606889 253 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.68□□□□□ -2.14
PTPN6P29350 DISC2.1-201ENST00000612827 205 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms