Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
ABCD3P28288 AC010928.2-201ENST00000588017 287 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 SNRPGP20-201ENST00000604477 205 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AC098657.3-201ENST00000620434 263 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
ABCD3P28288 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
ABCD3P28288 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.35□□□□□ -2.03
ABCD3P28288 AL136360.1-201ENST00000503377 1900 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ABCD3P28288 Y_RNA.2-201ENST00000362330 96 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 U8.10-201ENST00000384260 133 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 MIR32-201ENST00000384965 70 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 HMGN2P39-201ENST00000398005 273 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 USMG5P1-201ENST00000425964 177 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.35□□□□□ -2.03
ABCD3P28288 MTND5P20-201ENST00000448677 143 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 RPL30P10-201ENST00000488148 337 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.35□□□□□ -2.03
ABCD3P28288 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 Y_RNA.670-201ENST00000516255 105 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.35□□□□□ -2.03
ABCD3P28288 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.35□□□□□ -2.03
ABCD3P28288 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.35□□□□□ -2.03
ABCD3P28288 AC104581.2-201ENST00000572227 430 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AC016727.2-201ENST00000603988 621 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AC113139.1-201ENST00000605049 239 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.35□□□□□ -2.03
ABCD3P28288 AC009229.3-201ENST00000608056 282 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 TCL6_2.1-201ENST00000615162 119 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 BX322639.1-202ENST00000423987 2213 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 KPNA2P1-201ENST00000458289 1591 ntBASIC2.35□□□□□ -2.03
ABCD3P28288 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ABCD3P28288 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ABCD3P28288 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 SNORA18.2-201ENST00000383865 132 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RNU1-138P-201ENST00000384093 164 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RNU6-1026P-201ENST00000384465 108 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 MIR1262-201ENST00000408276 93 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ABCD3P28288 AC027124.2-201ENST00000428249 105 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 Z82188.1-201ENST00000436709 154 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 HMGN2P18-201ENST00000450680 270 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RPL23AP94-201ENST00000512518 302 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 RNU6-1098P-201ENST00000516772 96 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 Y_RNA.702-201ENST00000516843 96 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.34□□□□□ -2.03
ABCD3P28288 MIR5092-201ENST00000583139 88 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
ABCD3P28288 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.34□□□□□ -2.03
ABCD3P28288 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ABCD3P28288 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.34□□□□□ -2.04
ABCD3P28288 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.33□□□□□ -2.04
ABCD3P28288 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ABCD3P28288 RNU5F-3P-201ENST00000363767 117 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 SNORD31B-201ENST00000364977 69 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 Y_RNA.332-201ENST00000365271 113 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 RNU6-438P-201ENST00000365561 103 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 RNU6-1009P-201ENST00000390996 107 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.33□□□□□ -2.04
ABCD3P28288 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.33□□□□□ -2.04
ABCD3P28288 RNU7-14P-201ENST00000459331 62 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 MTND4P17-201ENST00000470444 350 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.33□□□□□ -2.04
ABCD3P28288 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.33□□□□□ -2.04
ABCD3P28288 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.33□□□□□ -2.04
ABCD3P28288 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 CBX3P8-201ENST00000532412 525 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.33□□□□□ -2.04
ABCD3P28288 MIR4672-201ENST00000583126 81 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AC016727.1-205ENST00000605437 569 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AL359314.1-201ENST00000616913 261 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AC092794.2-201ENST00000620933 563 ntBASIC2.33□□□□□ -2.04
ABCD3P28288 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.33□□□□□ -2.04
ABCD3P28288 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ABCD3P28288 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ABCD3P28288 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
ABCD3P28288 Y_RNA.319-201ENST00000365138 92 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNU6-245P-201ENST00000384020 107 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNU6-17P-201ENST00000384245 107 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNU6-18P-201ENST00000384527 107 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 SNORA75.4-201ENST00000391278 119 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.32□□□□□ -2.04
ABCD3P28288 AC091951.2-201ENST00000500762 203 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms