Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC009318.2-201ENST00000610917 651 ntBASIC2.17□□□□□ -2.06
PTPN3P26045 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
PTPN3P26045 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PTPN3P26045 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTPN3P26045 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
PTPN3P26045 RNU6-968P-201ENST00000384076 107 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 SNORA29-201ENST00000384183 140 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 MIR29C-201ENST00000385231 88 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNA5SP425-201ENST00000410336 112 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNU6-174P-201ENST00000410406 106 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC074085.1-201ENST00000413598 418 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 HMGB1P18-201ENST00000438801 619 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 HMGN1P12-201ENST00000499125 195 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC021146.2-201ENST00000504736 556 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNU6-1016P-201ENST00000516689 94 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNU6-965P-201ENST00000516721 96 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 RNU1-54P-201ENST00000517181 120 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN3P26045 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN3P26045 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC009994.1-201ENST00000606889 253 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 PCGEM1.1-201ENST00000613431 131 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 AC005858.4-201ENST00000623191 700 ntBASIC2.16□□□□□ -2.06
PTPN3P26045 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PTPN3P26045 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PTPN3P26045 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
PTPN3P26045 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.15□□□□□ -2.06
PTPN3P26045 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PTPN3P26045 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 Y_RNA.184-201ENST00000363884 108 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 SNORD81.2-201ENST00000365153 76 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 SNORA36A-201ENST00000384221 132 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PTPN3P26045 AC107399.1-201ENST00000451226 265 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.15□□□□□ -2.07
PTPN3P26045 AC132942.1-201ENST00000486753 483 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.15□□□□□ -2.07
PTPN3P26045 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN3P26045 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN3P26045 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN3P26045 AC005668.1-201ENST00000571142 476 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 MIR5696-201ENST00000578474 85 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 AL355073.2-201ENST00000612106 557 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 AL132822.1-201ENST00000617063 513 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 SCARNA4-201ENST00000629045 128 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN3P26045 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTPN3P26045 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
PTPN3P26045 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPN3P26045 MIR548F5-201ENST00000408421 86 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 MIR1294-201ENST00000408503 142 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 SNORA11.4-201ENST00000408823 129 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 AL353705.4-201ENST00000449661 238 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 AC005741.1-201ENST00000511094 432 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 EIF4A1P12-201ENST00000551910 141 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 UBE2V2P2-201ENST00000587677 504 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 RPL17P51-201ENST00000605218 238 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 AC018462.2-201ENST00000605375 395 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
PTPN3P26045 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 AC137590.2-201ENST00000619709 240 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 AC098657.3-201ENST00000620434 263 ntBASIC2.14□□□□□ -2.07
PTPN3P26045 MTND4P12-201ENST00000498999 1377 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 SNORA72.1-201ENST00000363485 129 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 U3.9-201ENST00000363823 204 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 RNU6-743P-201ENST00000364151 106 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 Y_RNA.303-201ENST00000364998 94 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 Y_RNA.482-201ENST00000384377 111 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 AL023284.1-201ENST00000403956 276 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.13□□□□□ -2.07
PTPN3P26045 RPS3AP52-201ENST00000435639 297 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.13□□□□□ -2.07
PTPN3P26045 AC103851.1-201ENST00000506833 274 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 RPL23AP94-201ENST00000512518 302 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MIR1273D-201ENST00000577266 86 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MIR6128-201ENST00000615528 109 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 TPTEP1-208ENST00000636884 213 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTPN3P26045 AC233981.2-201ENST00000611524 1614 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 MTND5P9-201ENST00000503854 1755 ntBASIC2.13□□□□□ -2.07
PTPN3P26045 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
PTPN3P26045 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 SNORD115-32-201ENST00000364079 82 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 RNU6-306P-201ENST00000384617 107 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 SNORA12-201ENST00000391162 147 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 SNORA3.2-201ENST00000408221 125 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms