Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC027288.2-201ENST00000553028 243 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR2AP24928 AC037487.3-201ENST00000606668 112 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 SNORD113-5-201ENST00000607261 78 ntBASIC3.06□□□□□ -1.92
POLR2AP24928 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR2AP24928 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
POLR2AP24928 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR2AP24928 Y_RNA.29-201ENST00000362570 113 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 SNORD50.1-201ENST00000362987 71 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 SNORD81.1-201ENST00000363064 77 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 Y_RNA.515-201ENST00000384535 112 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR10A-201ENST00000385043 110 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR325-201ENST00000385260 98 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 FTH1P15-201ENST00000406984 280 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.05□□□□□ -1.92
POLR2AP24928 AC079780.1-201ENST00000428259 207 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 AK3P2-201ENST00000507976 429 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR5701-3-201ENST00000578890 82 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR5701-1-201ENST00000585138 82 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 RPS29P30-201ENST00000600975 111 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR5701-2-201ENST00000615634 82 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 AC048347.1-201ENST00000624621 427 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
POLR2AP24928 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2AP24928 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
POLR2AP24928 RNU6-961P-201ENST00000363893 105 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 SNORA7.2-201ENST00000364446 145 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 AC012308.1-201ENST00000451232 178 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 U8.22-201ENST00000459141 133 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 AC078918.1-201ENST00000498515 228 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 SNORA25.14-201ENST00000516481 132 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 RNA5SP291-201ENST00000517222 105 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 MIR4635-201ENST00000583759 79 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 PWAR6-201ENST00000552334 4618 ntBASIC3.05□□□□□ -1.92
POLR2AP24928 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2AP24928 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR2AP24928 SNORD115-32-201ENST00000364079 82 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 AL079342.1-201ENST00000401460 267 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 Y_RNA.602-201ENST00000410535 92 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR2AP24928 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2AP24928 RNU6-496P-201ENST00000516145 99 ntBASIC3.04□□□□□ -1.92
POLR2AP24928 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2AP24928 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2AP24928 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR2AP24928 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2AP24928 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR2AP24928 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 Y_RNA.122-201ENST00000363331 96 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 Y_RNA.269-201ENST00000364685 89 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 RNU5A-5P-201ENST00000411054 116 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 EIF1AXP1-201ENST00000419267 435 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AL512844.2-201ENST00000433990 593 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AC006539.3-201ENST00000454258 129 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 snoU13.23-201ENST00000458863 104 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 COX6CP14-201ENST00000469580 174 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 RNU6-703P-201ENST00000516946 107 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 RNU6-789P-201ENST00000517105 102 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR2AP24928 AC022441.3-201ENST00000605737 136 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR2AP24928 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR2AP24928 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
POLR2AP24928 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
POLR2AP24928 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR2AP24928 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
POLR2AP24928 Y_RNA.331-201ENST00000365267 102 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 SNORD63-201ENST00000384262 68 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AL359511.1-201ENST00000402970 211 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR2AP24928 RNU5E-9P-201ENST00000411164 104 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR2AP24928 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR2AP24928 RPS26P21-201ENST00000475397 348 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AL049874.1-201ENST00000489560 388 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 SYF2P1-201ENST00000550658 413 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AC019159.1-201ENST00000605094 187 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AL356157.2-201ENST00000605122 111 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 Y_RNA.772-201ENST00000606692 102 ntBASIC3.03□□□□□ -1.92
POLR2AP24928 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR2AP24928 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR2AP24928 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
POLR2AP24928 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
POLR2AP24928 RNU6-527P-201ENST00000363425 104 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RNA5SP189-201ENST00000364920 115 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RNU6-290P-201ENST00000365212 101 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 Z98749.2-208ENST00000381646 500 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RNU6-318P-201ENST00000384283 103 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 SNORA3.2-201ENST00000408221 125 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RPL21P66-201ENST00000426566 466 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 AC010285.1-201ENST00000470580 392 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RPL30P1-201ENST00000488676 339 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RNU6-1278P-201ENST00000516130 107 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 Y_RNA.676-201ENST00000516393 96 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 Y_RNA.703-201ENST00000516846 111 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 RNA5SP54-201ENST00000516951 92 ntBASIC3.02□□□□□ -1.93
POLR2AP24928 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR2AP24928 FAM60BP-201ENST00000578364 658 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms