Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-898P-201ENST00000365627 104 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.34□□□□□ -2.19
COL5A1P20908 Y_RNA.399-201ENST00000383955 105 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 Y_RNA.414-201ENST00000384011 101 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 MIR625-201ENST00000385047 85 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AC009161.1-201ENST00000417306 376 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AC099548.1-201ENST00000421443 426 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 RPL31P63-201ENST00000422565 375 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 TRBVA-201ENST00000498804 316 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AC018710.1-201ENST00000506509 158 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.34□□□□□ -2.19
COL5A1P20908 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.34□□□□□ -2.19
COL5A1P20908 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL5A1P20908 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL5A1P20908 AC087854.1-201ENST00000519706 414 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.34□□□□□ -2.19
COL5A1P20908 AC107953.1-201ENST00000522216 297 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.34□□□□□ -2.19
COL5A1P20908 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.34□□□□□ -2.19
COL5A1P20908 AL442663.2-201ENST00000554385 511 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AL355375.2-201ENST00000574825 175 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 POLR3GP2-201ENST00000588366 668 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL5A1P20908 uc_338.15-201ENST00000615470 191 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 AL449363.1-201ENST00000617815 186 ntBASIC1.34□□□□□ -2.19
COL5A1P20908 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.34□□□□□ -2.19
COL5A1P20908 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.34□□□□□ -2.19
COL5A1P20908 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL5A1P20908 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.34□□□□□ -2.2
COL5A1P20908 Y_RNA.86-201ENST00000363020 111 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 Y_RNA.151-201ENST00000363566 112 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-1188P-201ENST00000363795 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-461P-201ENST00000364195 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-1317P-201ENST00000364582 104 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-1032P-201ENST00000384100 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MIR518D-201ENST00000385014 87 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-293P-201ENST00000411259 106 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC092809.3-201ENST00000415453 231 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 PDCL2P1-201ENST00000419302 352 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.33□□□□□ -2.2
COL5A1P20908 HMGB1P9-201ENST00000429856 646 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.33□□□□□ -2.2
COL5A1P20908 MTND1P18-201ENST00000448191 573 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU7-26P-201ENST00000458980 63 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 AC114786.4-201ENST00000508771 728 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-1332P-201ENST00000516666 104 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-703P-201ENST00000516946 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU1-104P-201ENST00000517280 175 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.33□□□□□ -2.2
COL5A1P20908 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.33□□□□□ -2.2
COL5A1P20908 AP005639.2-201ENST00000527592 928 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RAB11AP2-201ENST00000545905 639 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.33□□□□□ -2.2
COL5A1P20908 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.33□□□□□ -2.2
COL5A1P20908 BNIP3P25-201ENST00000596023 559 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 DPPA3P3-201ENST00000603842 430 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AL133215.3-201ENST00000609801 448 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RMST_4.1-201ENST00000616886 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC022418.1-201ENST00000624118 445 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.33□□□□□ -2.2
COL5A1P20908 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL5A1P20908 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL5A1P20908 Y_RNA.72-201ENST00000362894 103 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU5E-7P-201ENST00000365290 117 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-1179P-201ENST00000384667 107 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MIR450B-201ENST00000401182 78 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MTND4P28-201ENST00000426217 387 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MTND1P14-201ENST00000427400 950 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC092573.2-201ENST00000434546 243 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.33□□□□□ -2.2
COL5A1P20908 AC087884.1-201ENST00000469738 328 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 RNA5SP436-201ENST00000516020 115 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU1-86P-201ENST00000516108 154 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU1-107P-201ENST00000516617 154 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 RNU6-256P-201ENST00000516747 97 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 BTF3P12-201ENST00000519620 469 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 COPS8P3-201ENST00000526024 482 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.33□□□□□ -2.2
COL5A1P20908 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 MIR3122-201ENST00000577243 73 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 HMGN2P15-201ENST00000585707 270 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 HSPE1P7-201ENST00000604681 321 ntBASIC1.33□□□□□ -2.2
COL5A1P20908 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.33□□□□□ -2.2
COL5A1P20908 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL5A1P20908 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
COL5A1P20908 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL5A1P20908 RNU6-778P-201ENST00000363269 103 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU6-128P-201ENST00000383976 107 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU6-1080P-201ENST00000383982 107 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU6-214P-201ENST00000384130 107 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU6-933P-201ENST00000384424 107 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 MIR578-201ENST00000384828 96 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 MIR517A-201ENST00000385001 87 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms