Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR676-201ENST00000390702 67 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 RNU4-55P-201ENST00000410731 137 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 ZNF885P-201ENST00000420174 1098 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.07□□□□□ -2.24
COL11A1P12107 MTCYBP8-201ENST00000422855 651 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.07□□□□□ -2.24
COL11A1P12107 AL358934.1-201ENST00000432346 324 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.07□□□□□ -2.24
COL11A1P12107 RPL23AP6-201ENST00000446637 472 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 HSPE1P24-201ENST00000450782 238 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 HAR1A.1-201ENST00000459583 118 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AC087884.1-201ENST00000469738 328 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AC091435.1-201ENST00000505442 584 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 RNA5SP401-201ENST00000515920 127 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 SNORD27.1-201ENST00000516319 72 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 RNU6-1069P-201ENST00000516612 133 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 MTND1P35-201ENST00000526739 508 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 HIF1AP1-201ENST00000553642 175 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.07□□□□□ -2.24
COL11A1P12107 MIR4299-201ENST00000577899 72 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 MIR3941-201ENST00000582572 103 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.07□□□□□ -2.24
COL11A1P12107 AP001596.2-201ENST00000608410 312 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
COL11A1P12107 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.07□□□□□ -2.24
COL11A1P12107 AC008133.2-201ENST00000624540 351 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 U6.99-201ENST00000637524 83 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 AC073869.6-201ENST00000640656 341 ntBASIC1.07□□□□□ -2.24
COL11A1P12107 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COL11A1P12107 RNU6-552P-201ENST00000362869 119 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 Y_RNA.115-201ENST00000363272 98 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU6-529P-201ENST00000363383 104 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNY3P3-201ENST00000363816 102 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 SNORD115-7-201ENST00000365306 82 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL11A1P12107 RNU2-23P-201ENST00000410545 195 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU2-16P-201ENST00000410712 136 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU4-46P-201ENST00000410818 138 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 ARL5AP1-201ENST00000418991 388 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
COL11A1P12107 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.06□□□□□ -2.24
COL11A1P12107 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC003071.1-201ENST00000451219 789 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 snoU109.2-201ENST00000459316 135 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC027575.1-201ENST00000481064 460 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.06□□□□□ -2.24
COL11A1P12107 AC107401.1-201ENST00000503426 685 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC114801.2-201ENST00000503825 781 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 SMURF2P1-201ENST00000514992 481 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU1-86P-201ENST00000516108 154 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU6-123P-201ENST00000516163 102 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 SCARNA24.1-201ENST00000516465 137 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 RNU1-107P-201ENST00000516617 154 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.06□□□□□ -2.24
COL11A1P12107 DEFB108E-201ENST00000524692 240 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 MIR1273G-201ENST00000577677 100 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AC004492.1-201ENST00000607036 742 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 U2.17-201ENST00000611454 95 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AL159153.1-201ENST00000619688 317 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 AL359880.1-201ENST00000621879 266 ntBASIC1.06□□□□□ -2.24
COL11A1P12107 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL11A1P12107 Y_RNA.38-201ENST00000362617 102 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNA5SP257-201ENST00000363023 116 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-1085P-201ENST00000363576 107 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC092809.3-201ENST00000415453 231 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC097463.2-201ENST00000421074 142 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC243964.1-201ENST00000441814 261 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AL360271.2-201ENST00000447710 161 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AL356010.1-201ENST00000456364 102 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC107032.1-201ENST00000485945 480 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 Y_RNA.654-201ENST00000497848 106 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.05□□□□□ -2.24
COL11A1P12107 SNORA14.1-201ENST00000516113 141 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-1178P-201ENST00000516674 107 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-430P-201ENST00000517078 107 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.05□□□□□ -2.24
COL11A1P12107 BNIP3P6-201ENST00000549284 499 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.05□□□□□ -2.24
COL11A1P12107 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.05□□□□□ -2.24
COL11A1P12107 BNIP3P25-201ENST00000596023 559 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC012557.2-201ENST00000605919 418 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 AC080100.1-201ENST00000624239 5356 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 MIR126-201ENST00000362291 85 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 Y_RNA.33-201ENST00000362591 102 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 SNORD14B-201ENST00000364533 90 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-384P-201ENST00000364900 104 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-483P-201ENST00000384088 108 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-72P-201ENST00000384285 79 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 SNORD70.1-201ENST00000391007 85 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU2-63P-201ENST00000410792 194 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RNU6-1068P-201ENST00000410958 103 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms